Gene Information

Name : Toce_0157 (Toce_0157)
Accession : YP_003824571.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 149288 - 150604 bp
Length : 1317 bp
Strand : +
Note : COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049:IPR000362:IPR003031:IPR020557; KEGG: sth:STH486 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccina

DNA sequence :
ATGAGCAAAAAACTATGGGGCGGAAGGTTTGAGAAGGAAACCGACGATCTGGTTGAAAAATTCACCGCATCGATAGATTT
TGATAAGAGACTTTACGAACAGGATATAAAAGGCAGTATGGCCCACGCCAGGATGCTGGCAAGAGCCGGCATAATCCCGA
AAGAAGAGGCCGCCGAGATCATAAAGGGGCTCCTGGAGATCAAGCTTGAAATAGAACGGGGCGAATTCCCCTTCACCTGC
GAACTGGAAGACATACACATGCATGTGGAAAGCCGGCTCTTTGAGAAAATAGGCCCGGTAGCTGGCAAGCTCCATACGGC
CCGCAGCCGCAACGACCAGGTGGCTCTGGACCTACACCTTTACGTAAAGGAGAAGATTGCGGAGGTCGTCGGAAAAATCG
ACGAACTCATGAAAGTACTCCGGAAACTGGCTGCGGAAAACCGTGATGCGGTCATGCCCGGATACACCCATCTCCAGAGG
GCGCAGCCGGTGACCCTTTCCCGGCACTTAAAAGCCTATTATTACATGCTCCGGAGGGATAAGGAGCGCTTTTCGAAAGC
GTTAAAGGGCGCCGACATAATGCCCCTGGGGGCATGCGCCCTGGCCGGAACCACGCTCCCCATAGACAGGGAATACACCG
GGGAACTTCTCGGGTTTTCTAGAATTTACGAAAACACAATAGATGCCGTCAGCGACAGGGATTTCGTCATCGAATTCATA
TCCTGTTCGGCAATACTCATGGTCCACCTTTCCAGGATGGCCGAAGATCTGATCCTGTGGAGCACCTCCGAATTCGATTT
TATAGAGCTGGACGACGCCTTCGCCACCGGCAGCAGCATTATGCCGCAGAAAAAGAATCCCGACGTGCTGGAACTCATCC
GGGGGAAGGCGGGGCGGGTCTTCGGCAACCTGATGTCGGTCCTGACCGTGATGAAAGGCCTGCCGCTTTCATACAACCGG
GATATGCAGGAGGACAAAGAGCCGCTCTTCGACACGGCGGATACCGTGATTGGGTGCCTTAAGGTACTGCCGAAATTGCT
TTCCACCATGAAGATCAAGAAGGAAAACATGAAGAAAGCCGTAGAAGAAAGCTTTTCCGACGCCACCTATTACGCCGAAT
ACCTGGTGAAAAAGGGCATGCCCTTTCGGGCAGCCCACGAGGTGGTGGGGAAGATGGTTTCCTACTGTATCAAGAAGAAT
AAGAAACTGAGTGATTTGAGCCTTCGGGAATTCAAGAACTTTTCCAAGCTCTTTGATGAAGATGTGCTGGACCTTTCCCG
CTATCCGGAAAAAGTGAAAAATAAAAAAGTTTTATAG

Protein sequence :
MSKKLWGGRFEKETDDLVEKFTASIDFDKRLYEQDIKGSMAHARMLARAGIIPKEEAAEIIKGLLEIKLEIERGEFPFTC
ELEDIHMHVESRLFEKIGPVAGKLHTARSRNDQVALDLHLYVKEKIAEVVGKIDELMKVLRKLAAENRDAVMPGYTHLQR
AQPVTLSRHLKAYYYMLRRDKERFSKALKGADIMPLGACALAGTTLPIDREYTGELLGFSRIYENTIDAVSDRDFVIEFI
SCSAILMVHLSRMAEDLILWSTSEFDFIELDDAFATGSSIMPQKKNPDVLELIRGKAGRVFGNLMSVLTVMKGLPLSYNR
DMQEDKEPLFDTADTVIGCLKVLPKLLSTMKIKKENMKKAVEESFSDATYYAEYLVKKGMPFRAAHEVVGKMVSYCIKKN
KKLSDLSLREFKNFSKLFDEDVLDLSRYPEKVKNKKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 3e-107 55
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 3e-107 55