Gene Information

Name : Toce_1449 (Toce_1449)
Accession : YP_003825824.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 1417027 - 1417401 bp
Length : 375 bp
Strand : -
Note : COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR018334; KEGG: tex:Teth514_1161 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein, ArsR; PFAM: Bacterial regulatory prote

DNA sequence : 
ATGAATGAAAGGAAAAATTCAAGCGCGGATTTATGCGATGTATTTTGTATCGACGAAGAAAAGGTAAGAACCCTGATGGG
GACCGTACCCGATATGGGGGATTTGGCGGAACTGTTTAAAGTACTGGCTGATGAAACCAGAGCTAAAATCGTGTATCTAC
TTTCAAAGGAAGAACTTTGCGTATGCGATATTGCGGCAATACTGGGGATGACCGTATCCAACGTCTCCCATCACCTCCGG
GTTCTCCGGGTGGCGCACCTTGTTAAATTCCGGCGGGACGGGAAACAGGTGTATTATTCGCTGGATGACGATCACGTAAT
TCAAATCATTAAAGAAGGCTTCGAACACGTCAACCATACGAGAAAGCAGCGGTGA

Protein sequence : 
MNERKNSSADLCDVFCIDEEKVRTLMGTVPDMGDLAELFKVLADETRAKIVYLLSKEELCVCDIAAILGMTVSNVSHHLR
VLRVAHLVKFRRDGKQVYYSLDDDHVIQIIKEGFEHVNHTRKQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-21 45
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-21 45
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 2e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Toce_1449 YP_003825824.1 ArsR family transcriptional regulator BAC0056 Protein 2e-22 47
Toce_1449 YP_003825824.1 ArsR family transcriptional regulator BAC0456 Protein 1e-19 41
Toce_1449 YP_003825824.1 ArsR family transcriptional regulator BAC0366 Protein 6e-15 41
Toce_1449 YP_003825824.1 ArsR family transcriptional regulator BAC0281 Protein 2e-09 41