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Name : Toce_1336 (Toce_1336) Accession : YP_003825714.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1291917 - 1293635 bp Length : 1719 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482; KEGG: amt:Amet_3482 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein DNA sequence : TTGTTGAATATTAATATACGGAAAAATTTTCTACACTTAAAGTGCGGCGATGATGAGGCTGTGGAAAAGAGATTGGGCGA TATATTGTTGGAACAAAACATCATAACGAAATCTCAGCTGGAAAAAGCGCTGGATATTCAGAAAAAAACCGGGAAACTGA TCGGAGAAATCATGGTGGATATGGGTATTATCAGAGAAAAAATGCTGATGGAGGCTCTGGAATTTCAGCTGGGAATCCCT CACGTTGACTTAAATGTATATGACATCGATCCACAGGTCGTTAAATTTTTACCTGAAAGCCTGGCTAGGAAGTACGGTGT TTTCCCGTTAAAATATAAAGACGGCATACTTACGGTAGTCTTTAGTGATCCGTTGGATGTTTTTGCTGTAAACGACGTAA GGGTAATAACGGGGTTGGACATTCAGGTGGCCATAGCTTCAAGAGGGCAAATAGAAAGGGCAATAGATATATTTTACTCT GCAAAAGACTCTATAGAAGAGGTTTTGCGGGAAATAGGAAGCGAAATCTACGAAGAACCGCTTATTGACACTTCTTACGA TGAAGACAGCGCCCCAATAATAAAGCTTGTAAATACTGTCCTGTTCAGGGCGATCAATGAAGGTGCGAGCGATATTCATA TAGAACCTCAGGAAAGGGATATAAGGGTAAGATACCGCATTGATGGGGAGCTGTTCGAAATTATAAGATGGCCCAAAAAG CTTCTTGCTTCGGTCATTACGAGGATAAAAATAATGGCCGGTATGGATATAGCTCAAAAGAGGGTGGCGCAAGATGGCCG CATAGAACTTTCTGTAAACGATTCGATTATTGACATTAGGGTGTCAACAATGCCAACGATTCACGGTGAGAAGGTTGTTT TGAGAATTTTTAATCGCCACCGCATGCACCTCGACTTAAAGCACCTGGGTTTTGATGAGCGCGAGCTTGATTCGATCTCT AAGATGCTTAAATTTCCTTGCGGGATGATCCTGGTTACGGGCCCCACCGGTAGCGGCAAAACAACTACTCTTTACTCAAT GTTGAATTCCATAAATACACCGGCGAAAAACATTGTGACCCTGGAAGATCCGGTAGAATACGTATTGGACGGTATTAACC AACTTCAGATTAATCCAAAGGCGGGAATTACATTTGCTGCAGGGCTTCGCTCTGTTTTGAGGCAGGATCCGAACGTGATA ATGGTAGGTGAGATAAGAGACCGCGAAACGGCGGAAATAGCTGTGAGGGCTGCGCTTACGGGCCACCTGGTCTTCTCAAC TTTACATACAGGTGATGCGGTAGGATCCATCACAAGATTGCTAGACATGGGCATAGAACCCTATCTTGTGGCTTCCAGTT TAATAGGTGTGGTATCCCAGAGATTGGTAAGAAAAATATGCCCGTATTGTAAAGAAGAATACCAGCCAGAAGATAGAGAC CTTATAGCTCTCGGCATTAATAACCCAACAAGACTTTATCGAGGTAGAGGCTGTAAATTTTGTAACCAATCGGGGTTTAA AGGGCGTACAGTCGTGGCTGAAATACTTCTCATATCACAAGAACACCGAGAATTAATTATCAAGGGAGCCTCTACTGAAC AACTTTTAAAGGTTTCTTCGAGGTTGGGTTTTAAGAATATGAAAGAAAGTGCTCTAAGGCTTGTCATGAAGGGTATAACT ACTCCACATGAAATAATTAAGGTTATATTTTCCGATTGA Protein sequence : MLNINIRKNFLHLKCGDDEAVEKRLGDILLEQNIITKSQLEKALDIQKKTGKLIGEIMVDMGIIREKMLMEALEFQLGIP HVDLNVYDIDPQVVKFLPESLARKYGVFPLKYKDGILTVVFSDPLDVFAVNDVRVITGLDIQVAIASRGQIERAIDIFYS AKDSIEEVLREIGSEIYEEPLIDTSYDEDSAPIIKLVNTVLFRAINEGASDIHIEPQERDIRVRYRIDGELFEIIRWPKK LLASVITRIKIMAGMDIAQKRVAQDGRIELSVNDSIIDIRVSTMPTIHGEKVVLRIFNRHRMHLDLKHLGFDERELDSIS KMLKFPCGMILVTGPTGSGKTTTLYSMLNSINTPAKNIVTLEDPVEYVLDGINQLQINPKAGITFAAGLRSVLRQDPNVI MVGEIRDRETAEIAVRAALTGHLVFSTLHTGDAVGSITRLLDMGIEPYLVASSLIGVVSQRLVRKICPYCKEEYQPEDRD LIALGINNPTRLYRGRGCKFCNQSGFKGRTVVAEILLISQEHRELIIKGASTEQLLKVSSRLGFKNMKESALRLVMKGIT TPHEIIKVIFSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-91 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-91 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Toce_1336 | YP_003825714.1 | type II secretion system protein E | VFG2048 | Protein | 1e-91 | 42 |
| Toce_1336 | YP_003825714.1 | type II secretion system protein E | VFG1876 | Protein | 2e-89 | 41 |
| Toce_1336 | YP_003825714.1 | type II secretion system protein E | VFG1880 | Protein | 2e-82 | 41 |
