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Name : Toce_1271 (Toce_1271) Accession : YP_003825650.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1238096 - 1238995 bp Length : 900 bp Strand : - Note : COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011932:IPR004107:IPR002104; KEGG: bbe:BBR47_23810 probable tyrosine recombinase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Probable tyrosine recombinase; TI DNA sequence : TTGGTGATCGGCATGGAGGAATTATTAAAACAATTTTTAGAATTTTTAAGTGTTGAAAAAGGCCTTGCCCGCAACACAAT TGAATCCTATAGAAGGGATTTAAAAAGTTACCTAGTTTTTTTAAGATCCCAGCATATTCCGGATATCAAATTTACATCGA AGACCACTATAATATCGTATCTCTTGCTCATGCAGAAAAGCGGCAAAGCCAGTAGCAGCATTTCGCGAGCCTGTGCTGCA ATTAAATCCTTTTATCATTTTTTGGTACGAGAACGTTACATACAAGAAGACCCCACCGTAAATCTTGATACCCCTAAACT GGAAAAAAAGCTACCTAGGGTATTAACTGTAGAGGAAGTAGAAAGACTCCTGGAACAGCCCGATACCAGCAATCCGCTTG GCTTCAGGGATAAAACAATGCTGGAGGTATTATACGCCACCGGCATAAGGGTTTCTGAATTGATTTCTCTGACAGTGGAT GATGTAAATCTTGATATGGGGTTTTTACGATGCTTGGGGAAAGGCTCCAAAGAGAGAATCGTGCCTATAGGTTCCTTCGC CGTGAATTACCTGCGGCAGTACATAAACGACGTCAGAAAAAAGATACTAAAAGGAAAGAGCACCAATATCCTTTTTGTGA ATCACATGGGCCAAGCTTTAACAAGACAGGGATTTTGGAAAATAATAAAAAAATATGCACGTAAAGCAGGGATAAATAAA GTGATAACTCCCCACACGCTGCGTCACTCTTTTGCCACACATCTTATTGAAAACGGTGCAGACTTAAGAGCGGTACAGGA AATGCTAGGGCATGCCGATATATCTACGACTCAGGTGTACACACACATAACGAGAACGAGGATAAAAGAGGTTTATGATA AAACCCACCCGAGAGCTTGA Protein sequence : MVIGMEELLKQFLEFLSVEKGLARNTIESYRRDLKSYLVFLRSQHIPDIKFTSKTTIISYLLLMQKSGKASSSISRACAA IKSFYHFLVRERYIQEDPTVNLDTPKLEKKLPRVLTVEEVERLLEQPDTSNPLGFRDKTMLEVLYATGIRVSELISLTVD DVNLDMGFLRCLGKGSKERIVPIGSFAVNYLRQYINDVRKKILKGKSTNILFVNHMGQALTRQGFWKIIKKYARKAGINK VITPHTLRHSFATHLIENGADLRAVQEMLGHADISTTQVYTHITRTRIKEVYDKTHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-48 | 42 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-48 | 42 |
