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Name : Toce_1088 (Toce_1088) Accession : YP_003825472.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : ATP dependent peptidase subunit CodW Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG5405 EC number : - Position : 1067801 - 1068331 bp Length : 531 bp Strand : + Note : COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: pth:PTH_1249 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: ATP-dependent protease hslV; PFAM: Proteasome subunit DNA sequence : ATGTTCTCCGCTACCACCATAGTAGCTGTTGTTAACAAAAAGGGAGCCGCCATAGCCGGCGACGGTCAGGTGACTTTTGG GGAAAATACCATAATGAAGCATCACGCGAAGAAAATAAGAAAAATATATAACGGCCGGGTACTCGCAGGTTTTGCGGGTT CTGTGGCCGACGCGGTGACCCTTTTCGAAAAGTTTGAAGGAAAACTGGAGGAATTTCACGGTAATCTGGTAAGGGCCGCT GTAGAACTTGCAAAGGAATGGCGTACCGATAGAATGCTGAGAAAACTGGAAGCTCTGCTGATTGCGGCTGATAGGGAGCA CATACTTATAATTTCGGGTAACGGCGAAGTTATTGAACCCGATGATGGCATAGCGGCTATCGGTTCGGGAGGGCCGTACG CTCTGGCGGCTGCTAGGGCTCTTGCCCGCTTTACCGATTTACCTGCTGAGAAAATCGTGGAAGAAGCTTTAAAAATAGCT GCAGATATTTGTGTATATACGAATGACTTCATATCCGTTGAAGCTCTGTAA Protein sequence : MFSATTIVAVVNKKGAAIAGDGQVTFGENTIMKHHAKKIRKIYNGRVLAGFAGSVADAVTLFEKFEGKLEEFHGNLVRAA VELAKEWRTDRMLRKLEALLIAADREHILIISGNGEVIEPDDGIAAIGSGGPYALAAARALARFTDLPAEKIVEEALKIA ADICVYTNDFISVEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslV | YP_003728752.1 | protein HslV | Not tested | cag PAI | Protein | 1e-31 | 54 |
