|
Name : Toce_1070 (Toce_1070) Accession : YP_003825455.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1048869 - 1049210 bp Length : 342 bp Strand : + Note : COGs: COG0335 Ribosomal protein L19; InterPro IPR001857:IPR018257; KEGG: chy:CHY_1428 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal DNA sequence : ATGGACTTACTTAGAGCAGTAGAGGAAGAACAGATGAGAAAGGACATACCCGACTTCAGGCCGGGAGATACGGTGAAAGT CTACACCAAAGTAGTTGAGGGAAGCAGAGAGAGAATTCAGGTTTTTGAAGGTACCGTTATTGCCAGAAAAGGCGGCGGTT TGCGGGAAACGTTTACCGTCAGAAAGGTTTCCTATGGCGTGGGAGTAGAGAGGATTTTCCCTTTACACTCACCCCGTATT GATAAGATAGAAGTAGTTCAAAGAGGTAAGGTTCGCAGAGCGAAGCTTTATTACTTAAGAAACTTAAGGGGTAAAGCTGC GAGAATCAAGGAGAGGGACTGA Protein sequence : MDLLRAVEEEQMRKDIPDFRPGDTVKVYTKVVEGSRERIQVFEGTVIARKGGGLRETFTVRKVSYGVGVERIFPLHSPRI DKIEVVQRGKVRRAKLYYLRNLRGKAARIKERD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-35 | 70 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-28 | 60 |
