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Name : Closa_0945 (Closa_0945) Accession : YP_003821187.1 Strain : Clostridium saccharolyticum WM1 Genome accession: NC_014376 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1026738 - 1028357 bp Length : 1620 bp Strand : - Note : KEGG: ere:EUBREC_0892 glucan 1,6-alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGAACAGTAAATGGTGGAAACAAGCGGTTATCTATCAGATTTATCCCAAAAGCTTTCAGGACAGCAACGGGGATGGAAT CGGAGATCTTCAAGGGATTATCTCCAGACTTGACTATTTGAAAAAGCTGGGAGCAGATGCTCTCTGGCTCTCCCCAGTCT GTTGTTCGCCTCAGGATGACAATGGGTATGATATATCGGATTATCAGGATATCGATCCCATGTTCGGGAATTTAGAGGAC ATGGATGAGCTGATAGAAAAGGCAGGAAAGCAGGGGATCCGCATCATCATGGACCTCGTTTTAAATCATACTTCGGATGA ACATCCATGGTTCAAAGAAGCGAAAAAAAGTAAGGATAACCCCTATCACGATTATTATGTATGGAAGGATGGGGTTGCAG GAGTTGTGCCCAATGGGTTAAGGGCTTGTTTTGGCGGCCCGGCCTGGGAATGGGTTCCGGAACTTGGGCAATACTATTTT CATCAGTTTTCAGTAAAGCAGCCGGATCTTAACTGGGAAAATCCGAAGGTACGCCGGGAAATCCAGGATATGATTCTTTG GTGGATGGAGAAAGGAATCGGCGGATTCCGGCTGGATGTCATCGACTGTGTGGCAAAGGATCCTGACCGGCTGATCACAG CAGACGGGCCAAAGCTCCATACCTATATACAGGAGTTAAGCAGGGAGACCTTTCAGAAAGGAGATCTTGTCACCGTAGGG GAAGCATGGAGTGCAAATCCGGAAAGTGCCCTGCTTTACAGCAATCCGGATGGCAGGGAACTTTCCATGGTATTCCAGTT TGAGCATATCTGCCTTGACCAGAAAAAGGGCGGAGAAAAATGGGATTTGGCACCTCTTCCATTTCCGGAATTAAAGCGTG TCCTATCCGCCTGGCAGGAAGCCCTTTTCTGCAAGGGCTGGAACAGCCTGTTCTGGAACAACCATGACCTGCCGAGAATC GTATCCCGCTGGGGAAATGATAAGGAATACCGGGTGGAATCAGCCAAGATGTTTGCAATACTCCTTCATGGAATGCAAGG CACCCCCTATATCTACCAGGGCGAAGAACTTGGGATGACCAACGTAAGATATCATATAGAAGATTACCGGGATATAGAGA TTTTAAATTTATACCGGGAAAGAACCGAAGCCGGATATAAAAAATCCGATGTCATGGAGTCAATCTATACAAAAGGGAGG GATAATGCCAGAACGCCCATGCAGTGGAATCAGGGCAAAGAAGCTGGGTTTACAGAGGGAACTCCCTGGATCAAGGTGAA TCCAAACTATACAAAAATCAATGCAGAGGCTGCTCTGGCAGATGATACTTCTATTTTTTACCTTTACCAGAAGCTGATTG AGTTAAGGAAAACCTACGATGTATTCGCAGACGGGAAATACCGGCTTCTGCTGCCTGAGGATCCTGACATCTTTGCCTAT ACCCGTACACTGGAAAAAACTGTCTTGCTGGTGGTATGCAACTTTTACAGCAACAAGGTCTTGCTTCCGCTTCCCAAAGA ATTTGACTGTGAGAAAAAGCTGCTGGCCAGTTCCTATACGGATGAGGGCCTGCCGAATGAGCTCAGGCCCTATGAAGCCA GAATGTATCTGATCGGGTGA Protein sequence : MNSKWWKQAVIYQIYPKSFQDSNGDGIGDLQGIISRLDYLKKLGADALWLSPVCCSPQDDNGYDISDYQDIDPMFGNLED MDELIEKAGKQGIRIIMDLVLNHTSDEHPWFKEAKKSKDNPYHDYYVWKDGVAGVVPNGLRACFGGPAWEWVPELGQYYF HQFSVKQPDLNWENPKVRREIQDMILWWMEKGIGGFRLDVIDCVAKDPDRLITADGPKLHTYIQELSRETFQKGDLVTVG EAWSANPESALLYSNPDGRELSMVFQFEHICLDQKKGGEKWDLAPLPFPELKRVLSAWQEALFCKGWNSLFWNNHDLPRI VSRWGNDKEYRVESAKMFAILLHGMQGTPYIYQGEELGMTNVRYHIEDYRDIEILNLYRERTEAGYKKSDVMESIYTKGR DNARTPMQWNQGKEAGFTEGTPWIKVNPNYTKINAEAALADDTSIFYLYQKLIELRKTYDVFADGKYRLLLPEDPDIFAY TRTLEKTVLLVVCNFYSNKVLLPLPKEFDCEKKLLASSYTDEGLPNELRPYEARMYLIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-132 | 51 |
