Gene Information

Name : Closa_0504 (Closa_0504)
Accession : YP_003820764.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 571114 - 571503 bp
Length : 390 bp
Strand : +
Note : KEGG: dhd:Dhaf_0526 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain

DNA sequence : 
ATGGATTATCATTTAAAGGTGCGGGATTCCTTAAAGTATATTGAGGAACATTTAAACAAAAGAATTGATCTTGACGATCT
TGCAAAAAAAGCATATCTTTCGAAATATCATTATCATAGAATTTTTCACAAAGTGTCAGGGGAATCCGTGACCAGATATA
TCACCAGAAGGCGGATGGAGAAGGCCGCGGAAGAGCTTGCCCGAACCAATAAGCCAATCATTGATATCGCCCTGGAATAT
CAGTATGCATCCCAGGAATCTTTTTCAAGGGCATTTTTAAAGATTTATGGACTGACGCCGGGGAAATACCGAAGAAGAAA
TGGCGGCAGCTCCAATCCAGGAATCAATCTTAGCAACCGCATCAATAAAATTACGAATTTAGCCGCATAA

Protein sequence : 
MDYHLKVRDSLKYIEEHLNKRIDLDDLAKKAYLSKYHYHRIFHKVSGESVTRYITRRRMEKAAEELARTNKPIIDIALEY
QYASQESFSRAFLKIYGLTPGKYRRRNGGSSNPGINLSNRINKITNLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-16 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-16 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_0504 YP_003820764.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 4e-17 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_0504 YP_003820764.1 AraC family transcriptional regulator VFG1038 Protein 4e-17 47