|
Name : Closa_4230 (Closa_4230) Accession : YP_003824354.1 Strain : Clostridium saccharolyticum WM1 Genome accession: NC_014376 Putative virulence/resistance : Unknown Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4576675 - 4577385 bp Length : 711 bp Strand : + Note : KEGG: cpy:Cphy_0742 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver DNA sequence : ATGAATAAGTTTACAATAGTCATGATTGAAGACGAAAAGAATATCTGCAACTTTATTGAAAGCGCTTTAGAAAGACATGA TTATAAAGTGAATACAGCCCATAACGGCCGGGATGGGCTGGCCCTGATCAATTCCCTCTGCCCCGATGTGATCCTACTGG ATCTTGGGCTTCCTGACCTGGACGGGATTGATATCATAAAAAGTGTCCGAAGCTGGACTTCCATTCCCATTATTGTTATC TCTGCCAGGACCCAGGAGCATGAAAAGGTGGCTGCTCTTGATTATGGTGCCGATGATTATATTACAAAGCCCTTTGGGAC CAGCGAGCTGTTAGCCAGGATCCGCACTGCCCTGCGCCATGGAAGGCCTACGGTCAGTACGGTGGATGGTTCTGTCATCC CCACGCCATACAAGAGCGACGGTCTGGTCATTGATTTCGCCAAGCGTCTGGTCACACTGGAGGGCCATAAAATTCATTTG ACCCAGATCGAATACAAGCTGGTCTCCCTTCTTGCCATTCATTCCGGCAAGGTCCTGACCTATGACTACATCATAAGCCA TATCTGGGGACCTTACGCGGATAATAACAACCAGATCCTTCGGGTCAATATGGCCCATATCCGCAGAAAGATAGAGATTA ATCCGGCAGAGCCAAACTATATTTTCACGGAAATCGGAGTCGGTTACCGAATGAAAGAAAGCGAGATTTAG Protein sequence : MNKFTIVMIEDEKNICNFIESALERHDYKVNTAHNGRDGLALINSLCPDVILLDLGLPDLDGIDIIKSVRSWTSIPIIVI SARTQEHEKVAALDYGADDYITKPFGTSELLARIRTALRHGRPTVSTVDGSVIPTPYKSDGLVIDFAKRLVTLEGHKIHL TQIEYKLVSLLAIHSGKVLTYDYIISHIWGPYADNNNQILRVNMAHIRRKIEINPAEPNYIFTEIGVGYRMKESEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 5e-44 | 50 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 7e-44 | 50 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 2e-26 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 3e-26 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 3e-26 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 3e-26 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 3e-26 | 41 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-27 | 41 |
