Gene Information

Name : Closa_4117 (Closa_4117)
Accession : YP_003824247.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Virulence
Product : SgaT/UlaA family sugar-specific permease
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 4459742 - 4461091 bp
Length : 1350 bp
Strand : -
Note : KEGG: ssb:SSUBM407_0174 sugar-specific permease, SgaT/UlaA family

DNA sequence :
ATGGCTGTTTTAAAAATCATTCAGGAAATTCTTTCAACCCCTGCAGTGTTAGTGGCATTCATTGCGTTCATTGGTTTGCT
GCTGCAAAGAAAACCGGCAGCAGATACCATCAGGGGTACCATAAAATCATTTCTGGGTTTTATCGTACTATCGGCAGGAG
CAGATGTGATCGTCGCATCCCTGGCTCCCTTTGGAGGAATGTTTCAGGAAGCATTTCATACGGCAGGGGTTGTGCCCAAC
AATGAGGCCATTATTGCGGTAGCATTAAAGGACTATGGCCAGGTCACTGCCTTGATTATGTTTTTCGGGATGTTTGCCAA
CATTATCATTGCCCGTATTACCAGGTTTAAATATGTCTTTCTCACAGGACACCATACTCTTTACATGGCATGCATGATCG
GCGTTATCTTAATTACCATCGGCATGTCTACGGCGATGACCGTAGTGGTGGGCTCGGTTGCCCTTGGAATTGTTATGGTG
TTATTCCCTGCCCTGGCTCAGCCGACCATGAAAAAGATAACCAAAACCGATGATGTGGCCTTCGGTCATTTCAGCACCAT
CGGATACTGGTCTTCCGCAATGATCGGTAAATTAGTAGGGAAAAATTCAAAATCAACGGAAGAGATAGATTTCCCGAAAT
CCCTTGCATTTTTAAGAGACAGTTCGGTTTCCATTTCCCTGACGATGGTTCTCTTTTATGTGGTTCTTGCGCTTTTTTGC
GGACCGGACTATATTAAGAACAACTGGTCAGACGGAAAGAATTATATCATGTTTTCCATTACAAAAGGAATCCAATTTGC
AGCAGGTGTAGTAATTATATTACAGGGAGTCCGTCTGATCCTTGCAGAAATCGTGCCTGCGTTCAAAGGCATTTCAGAAA
AACTGATTCCCAATGCAAAGCCGGCCCTGGACTGTCCGATTGTTTATACCTTTGCGCCTAATGCTGTATTGATTGGTTTT
TTCTCCAGTTTTGCCGGCGGGATTGTGGGTATGGCGATTCTGGTTCTTACCGGCGGAATCATTATATTGCCGGGTGTTGT
GCCTCATTTCTTCTGCGGCGCAACGGCAGGAGTTTTCGGCAATGCCAACGGAGGGGTAAAAGGAGCGGTATTCGGTTCTT
TTATAAACGGTTTGATGCTGACCTTTGCACCGCTTTTATTAATGCCCCTGCTGGGAGATCTGGGTTATCAGGGAACAACC
TTTTCTGATCTGGATTTTATAGCTTCCGGATTTTTAATGGGGAAAGCCGGACAGTTAGGGCCTATGGCAGCTGCCATATT
CGTTTTTGGGGTGCTGGCAGTCATGATCGCTGTCTCAGCTGTAAAGTCTGACAGGAAAGACGTTAAATAA

Protein sequence :
MAVLKIIQEILSTPAVLVAFIAFIGLLLQRKPAADTIRGTIKSFLGFIVLSAGADVIVASLAPFGGMFQEAFHTAGVVPN
NEAIIAVALKDYGQVTALIMFFGMFANIIIARITRFKYVFLTGHHTLYMACMIGVILITIGMSTAMTVVVGSVALGIVMV
LFPALAQPTMKKITKTDDVAFGHFSTIGYWSSAMIGKLVGKNSKSTEEIDFPKSLAFLRDSSVSISLTMVLFYVVLALFC
GPDYIKNNWSDGKNYIMFSITKGIQFAAGVVIILQGVRLILAEIVPAFKGISEKLIPNAKPALDCPIVYTFAPNAVLIGF
FSSFAGGIVGMAILVLTGGIIILPGVVPHFFCGATAGVFGNANGGVKGAVFGSFINGLMLTFAPLLLMPLLGDLGYQGTT
FSDLDFIASGFLMGKAGQLGPMAAAIFVFGVLAVMIAVSAVKSDRKDVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 6e-100 57
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 4e-100 57
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 4e-100 57