Gene Information

Name : Closa_4114 (Closa_4114)
Accession : YP_003824244.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : 3.6.3.12
Position : 4455615 - 4457300 bp
Length : 1686 bp
Strand : -
Note : TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: lmy:LM5923_0178 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit

DNA sequence :
ATGAGCGTTATGGTAATGCAGGATCTGATTTATATGGCAGTGTTAGTTGGATTGTCCATTCCCCTGGGAATCTATATATA
CAAGGTGATGACAGGGCAAAGGGTGTTTCTTACCCCTGTTTTAGCCCCTGTGGAACGGGTGATCTATAAGCTTATGGGTA
CTGCTGCCGGGGAAGAAATGAACGCGGGGAAATATGCGGTTTCTGTTTTGTTATTCAGTGGGGTTGGCTTTGTTTTTCTT
TTTCTCTTGCTGATGCTCCAGGGGGCACTGCCCTTTAATCCGGAAAGGATGAAGGGTACCAGCTGGCACCTGGCCTTTAA
CACGGCCGCAAGCTTTACTACCAATACCAACTGGCAGGCATATTCAGGTGAATCCGACCTGTCGTATTTCACCCAGTTTA
CAGGCCTTGCCGTCCAGAACTTTGTATCGGCAGCAACGGGGATCGCAGTCCTTTTTGCCTTGATCAGAGGCTTGGTCCTG
AGACAGAAAAAGACCATTGGAAATTTTTGGGCGGACTTGGTAAGAACCACGCTCTATCTTCTCATCCCACTTTCCTTTGT
AGTGGCTCTGCTCCTTGTTTCCCAGGGGGTAGTGCAGACCTTTGGCCCTTACAAAGACGTAACCATGCTGGAAAGCGGGG
CTTTGCAGACAATTCCCTTAGGTCCTGCAGCAAGCCAGATTGCCATCAAGCAGCTGGGAACAAACGGAGGCGGTTTCTTT
GGAGTGAACTCTGCATTCCCTCTTGAGAATCCTACCGCCTTTTCCAACATGGTACAGTCCCTGTCCATTTTGCTGATTCC
TGCGGCCCTTTGCGTAAGTTTTGGAGGGGCGGTAAAAGACAGCAGACAGGGCCGGTCCATCTACCTCACCATGTTAATTT
TTTTTGGGGCGGCCCTGGCAGCAACAACTGCCAGCGAGCAGTTCGCCGGTCCTGTATTTGAACAGGTGGCAGCTTCCGGC
AGCATGGAAGGCAAGGAGGTGATCCATGGTGTAGGCGCTTCATCCTTATGGGCTGTTGTAACTACGGCGGCATCAAACGG
CTCTGTAAACGCCATGCACGACAGCCTGACTCCCCTTGGAGGAATGGTTCCCATGTTCCTCATGCAGCTTGGAGAAATTG
TATTCGGCGGCGTGGGAAGCGGACTTTACGGAATGCTTGCCTTTGTGCTCCTCACCGTATTCATAGCAGGACTGATGGTT
GGACGGACACCGGAGTACTTAGGGAAGAAGGTGGAGCCCTTTGATATGAAAATGGTATGCTTAATCGTCCTGGTACCTCC
GCTCCTGACCCTGCTTGGCACTTCTGCCGCAGTTGCTGTGCCTGAGGCCCGGTCATGGCTGACCAATTCAGGAGCCCATG
GATTTTCGGAGATTTTGTATGCCTTCTCCTCCATGGCAAACAACAACGGCAGTTCCTTTGCAGGTTTTCAGGCGAACACC
GTATTTACCAATGTTTTAGGCGGTATTATTATGCTGCTGGTTCGCTTTATCCCCATGACCGCTGTCATTTTCCTTGCAGG
GAATATGGCACAGAAAAAAGCAGTTGCTGTCAGCGAAGGGACTTTGTCCACCAGCAATACCGTATTTGTAGGGCTTCTGA
TTGGTGTGATCCTCATCATAGGCGCCCTGAGCTTTTTGCCGGCTCTTGCCCTAGGCCCAATCGCAGATTTTTTAACAACC
CAGTGA

Protein sequence :
MSVMVMQDLIYMAVLVGLSIPLGIYIYKVMTGQRVFLTPVLAPVERVIYKLMGTAAGEEMNAGKYAVSVLLFSGVGFVFL
FLLLMLQGALPFNPERMKGTSWHLAFNTAASFTTNTNWQAYSGESDLSYFTQFTGLAVQNFVSAATGIAVLFALIRGLVL
RQKKTIGNFWADLVRTTLYLLIPLSFVVALLLVSQGVVQTFGPYKDVTMLESGALQTIPLGPAASQIAIKQLGTNGGGFF
GVNSAFPLENPTAFSNMVQSLSILLIPAALCVSFGGAVKDSRQGRSIYLTMLIFFGAALAATTASEQFAGPVFEQVAASG
SMEGKEVIHGVGASSLWAVVTTAASNGSVNAMHDSLTPLGGMVPMFLMQLGEIVFGGVGSGLYGMLAFVLLTVFIAGLMV
GRTPEYLGKKVEPFDMKMVCLIVLVPPLLTLLGTSAAVAVPEARSWLTNSGAHGFSEILYAFSSMANNNGSSFAGFQANT
VFTNVLGGIIMLLVRFIPMTAVIFLAGNMAQKKAVAVSEGTLSTSNTVFVGLLIGVILIIGALSFLPALALGPIADFLTT
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 2e-110 57
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 2e-110 57
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 45
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 9e-66 45
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 45
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 45
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-65 45
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 2e-65 44