|
Name : Closa_4113 (Closa_4113) Accession : YP_003824243.1 Strain : Clostridium saccharolyticum WM1 Genome accession: NC_014376 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 4453542 - 4455599 bp Length : 2058 bp Strand : - Note : KEGG: lsg:lse_2587 K+-transporting ATPase B chain; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase DNA sequence : ATGGAAAAAAAGAGTGTTGATAAAAGCATCTTTTATGATGCGCTGAAACAGTCCTTTGTAAAGCTTTCTCCCCGTGTGCA GGTGAAAAACCCTGTCATGCTGGTAGTATATATAGGAGCGGTCCTGACTGGAATCTTATTTTTTATTTCCTTTGCAGGAC TTAAGGATGAAAATTCCGGTTATACCTTAACCATATCGTTGATTTTGTGGTTTACCGTGTTATTCGCCAACTTTGCAGAG GCCATTGCAGAGGGGAGGGGGCGGGCACAGGCAGACAGCCTGCGCAGCGCCAAAAAGGATGTAAAGGCTAAAAAGCTGAA ATCCGCTGCCAATATTGATGAAAATACAGAAGTCCTTTCCAATGCATTGAAAAAAGGAGATATCGTGTACGTGAAGGCTG GAGAGCAGATCCCCATGGATGGAGAAGTGATCGACGGCGCCGCCTCTGTGGACGAAAGTGCCATTACCGGGGAATCGGCA CCGGTCATCCGGGAATCAGGAGGAGACCGGAGCGCAGTCACCGGAGGAACCACCCTGGTGTCTGACTGGCTGATCATTGA AGTGACAGCGGAAGCGGGAGAAAGCTTTCTGGATAAAATGATTTCCATGGTAGAGGGGGCATCCAGAAAGAAGACCCCCA ACGAAGTGGCCCTCCAGATTTTACTTATAACCCTTACCATCATCTTTTTGGTGGTCACGGCAGCCCTGCGGCCGTTTACC GGGTTTGCAAGCGTCCAGACCGGGGCAGGCTCCGCCATTTCCATAACCAATGTCATTGCTCTCTTGGTATGCCTTGCTCC TACCACCATCGGTGCCCTGCTTTCCTCCATCGGCATTGCAGGCATGAGCCGGTTAAACCAGGCCAATGTTCTGGCTATGA GCGGGCGCGCCATTGAGGCGGCCGGAGATGTGGATGTGCTTTTGCTTGATAAAACCGGGACCATAACTCTTGGAAACCGC CAGGCCAGCGAATTTCTTCCTGTGGGAAACATCACGGAACGGGAGCTTGCCGATGCAGCCCAGCTTTCCTCTCTTGCGGA CCAGACGGCGGAAGGCAGAAGCATTGTGGTTCTGGCAAAGGAACGGTTTGGGATTCGCGGCAGGGAGCTTTCGGCCTTGG AAGCAAACTTTGTGGAATTTACGGCAAAGACCAGGATGAGCGGCATCAACTATCAGGGAAATGAGATCCGGAAGGGGGCT GCCGATACCATCAAAGCCTATGTACTGGAAAAGGGCGGCAGATATCCGGAGGAATGCGGGACCTTTGTTAAGCGTGTTGC CGAGGCGGGGGGGACTCCCCTTGTGGTGGCAAAGAATGATCAGGTAATGGGTGTGATCAATTTAAAGGACATCGTGAAAA ACGGTGTGAAGGAACGGTTTGAGGACCTGCGCAAAATGGGCATCAAGACCGTTATGATCACCGGGGATAATCCCATGACG GCAGCGGCGATTGCCGCAGAAGCAGGCGTTGATGATTTCCTGGCAGAAGCAACGCCGGAAGCGAAGCTGGCTCTCATTCG TGACTACCAGGCCAAAGGCCATCTGGTGGCCATGACGGGAGACGGCACAAATGACGCGCCTGCCCTGGCTCAGGCAGATG TTGCGGTTGCCATGAATACGGGAACCCAGGCGGCCAAGGAGGCAGGAAACATGGTGGATTTAGATTCCAGCCCCACCAAG CTCATTGATATTGTCAGGATCGGAAAACAGCTTTTAATGACAAGGGGCTCCTTAACCACCTTCAGCGTTGCAAACGATGT GGCAAAGTATTTCGCTATTATTCCGGTACTGTTTTTCGGTATTTACCCCCAGCTTGCCGCCTTAAATTTCATGGGGCTGA CCAGCGCTTCAAGTGCCATGCTTTCGGCAATCATTTATAACGCACTGATCATTATTGCCCTGATCCCCTTGGCCTTAAAA GGGGTAAAATACCGGGAACTGCCTGCTGAGAGGCTGCTGAAGAGAAACCTGCTGGTCTATGGCCTGGGGGGGATCTGTGC GCCGTTTGCTGCGATTAAGCTGATTGACATGATTCTGACCGGATGCGGTCTTGCTTAA Protein sequence : MEKKSVDKSIFYDALKQSFVKLSPRVQVKNPVMLVVYIGAVLTGILFFISFAGLKDENSGYTLTISLILWFTVLFANFAE AIAEGRGRAQADSLRSAKKDVKAKKLKSAANIDENTEVLSNALKKGDIVYVKAGEQIPMDGEVIDGAASVDESAITGESA PVIRESGGDRSAVTGGTTLVSDWLIIEVTAEAGESFLDKMISMVEGASRKKTPNEVALQILLITLTIIFLVVTAALRPFT GFASVQTGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNR QASEFLPVGNITERELADAAQLSSLADQTAEGRSIVVLAKERFGIRGRELSALEANFVEFTAKTRMSGINYQGNEIRKGA ADTIKAYVLEKGGRYPEECGTFVKRVAEAGGTPLVVAKNDQVMGVINLKDIVKNGVKERFEDLRKMGIKTVMITGDNPMT AAAIAAEAGVDDFLAEATPEAKLALIRDYQAKGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTK LIDIVRIGKQLLMTRGSLTTFSVANDVAKYFAIIPVLFFGIYPQLAALNFMGLTSASSAMLSAIIYNALIIIALIPLALK GVKYRELPAERLLKRNLLVYGLGGICAPFAAIKLIDMILTGCGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 72 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 72 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 7e-128 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-127 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-127 | 56 |
