|
Name : Closa_3489 (Closa_3489) Accession : YP_003823638.1 Strain : Clostridium saccharolyticum WM1 Genome accession: NC_014376 Putative virulence/resistance : Unknown Product : UvrD/REP helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0210 EC number : - Position : 3757360 - 3759219 bp Length : 1860 bp Strand : - Note : PFAM: UvrD/REP helicase; KEGG: spx:SPG_1254 ATP-dependent DNA helicase DNA sequence : ATGCAGGAAAGAATCCCACCTTTACAATGGACACCGAGTGGTGGAATAATATTGGAAGAAAATGCAACAACATCTGTAAA AGCTGAAAAAAATGTACTGGTCGTTGCAGGGCCAGGTGCTGGAAAAACCGAATTACTCGCACAAAAAACAGGATATTTAT TTCAAACAAATATCTGTACATATCCCAAAAAAATACTTGCTATCAGTTTTAAAACTGACGCTGCTGCAAACTTAAAAGAG AGAATAGAAAGTAGATATGGAAAAGAATATGCTATCAGATTTTCTTCTCTCACTTACGATGCGTTTGCAAAAAAGATTCT GGATCAATTTAGAAATGCTTTACCAGAAGAACTTTGTCCTAGCAAGGATTATATTATAGGAGACAAGAAAACTATTGATG CAGCATTCAAGAAATCTGGTTATTTGAATCCTAGAGGTTTAACACCTAGTAGATTGGCAGTGTATTATGAAAATGTGATT GCAACAACTCCTTTACCCGTATGCGGAGATTCTATTGGTAGTAATGTATGGAGATTACTAATTAGAGGTTTTGATGATAA TCCTTCGTGCTTAACTTTTAAAATGATAAGTATGTTGACAATATATATTTTTTCAACGAATCCATATGTATTAAGAGGTT TACAAGCGACATATTCCCATGTATTTTTAGATGAATTTCAGGATACAACCAGCTTGCAATATGATTTGGTTAAAATGGGT TTTCAAAATTCTAATTCTAAGATCACTGCTGTGGGGGATAATAAACAGCGAATCATGGTGTGGGCAGGTGCGAGGAAAAC TATCTTTGAAGATTTTCAGCAGGATTTCAACGCTATGAAGATTCCACTATTGATGAATCATAGATCTGCGCCACGACTAG TTGATTTACAGAAATTAATGTACACCTCTTTACAGGTGGATCTTATTGATTTACAAACTTCAAAAAAATGGGAGAAGAAT GATGGGGATATAAAACTGTATATATCAGAAAATGAAGATCTGGAAGCAAAATATCTGGTTGCAGATATAACCGAGAAAAT ATCTAATGGAGTTTCATTAAAAGATATTTGTATTTTAGTTAAACAATTACCGGGAAACTACATAGATACTCTTGTAACAG TACTTTCTTCTTTTGGTATTAAGGCAAGAATAGAAACGGAGTATCAAGACATATTAAAGGAATTTATTGTTGTACTCGTT TTGAATACATTAAAAGTTTCAATCAATCGACGCTCACCTACAGAATGGGAATATGTTAATAACGCAATGGAAGGACTGAA AGGATTTGATTCAACCGAAAGATCTGACGCATATGATCAGGAGCATATTAATTTAATAAACCTTCTGAATGCGACATCTG AGAAATTAGCTTTAGATATTACGGAAACCGAATTTCACGAAGTAATAAATAACATTATTCAATTCTTTGATATTGAGAAA ATAAAAGCGTTATATCCAACATATGCACAAGGAAATTTCTTTGAAGATATTGTTAATAAAATGATTGATCTATTATGGAA AGAATTTGAAGAATGTAATAATTGGAATCTATCCTTTGAAAATTTTCAAGGATTATATTCTATACCAATTATGACTATAC ATAAAAGTAAGGGGCTTGAGTATACAGCTGTTTACTTTGTAGGGCTTGAAGATGGTGCTTTTTGGAGTTTTAGAAATCAA CCTGAAGAAGATAGGTGTGCTTTTTTTGTCGCTCTTTCGAGGGCAAAAGAATTTTTGTCTTTTTCATTTTGTGCATATCG TCACAAGTTAAGGAATCCAAATCAAAAACATACAGAAATAAACGAATTTTTTGAACTATTAAAGTTGCCAGGTATCTCTA CTGTTATTAACTGTGATTAA Protein sequence : MQERIPPLQWTPSGGIILEENATTSVKAEKNVLVVAGPGAGKTELLAQKTGYLFQTNICTYPKKILAISFKTDAAANLKE RIESRYGKEYAIRFSSLTYDAFAKKILDQFRNALPEELCPSKDYIIGDKKTIDAAFKKSGYLNPRGLTPSRLAVYYENVI ATTPLPVCGDSIGSNVWRLLIRGFDDNPSCLTFKMISMLTIYIFSTNPYVLRGLQATYSHVFLDEFQDTTSLQYDLVKMG FQNSNSKITAVGDNKQRIMVWAGARKTIFEDFQQDFNAMKIPLLMNHRSAPRLVDLQKLMYTSLQVDLIDLQTSKKWEKN DGDIKLYISENEDLEAKYLVADITEKISNGVSLKDICILVKQLPGNYIDTLVTVLSSFGIKARIETEYQDILKEFIVVLV LNTLKVSINRRSPTEWEYVNNAMEGLKGFDSTERSDAYDQEHINLINLLNATSEKLALDITETEFHEVINNIIQFFDIEK IKALYPTYAQGNFFEDIVNKMIDLLWKEFEECNNWNLSFENFQGLYSIPIMTIHKSKGLEYTAVYFVGLEDGAFWSFRNQ PEEDRCAFFVALSRAKEFLSFSFCAYRHKLRNPNQKHTEINEFFELLKLPGISTVINCD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU98_0940 | YP_001200498.1 | DNA helicase | Not tested | 89K | Protein | 4e-109 | 47 |
| SSU05_0934 | YP_001198300.1 | DNA helicase | Not tested | 89K | Protein | 7e-85 | 44 |
