Gene Information

Name : Closa_3081 (Closa_3081)
Accession : YP_003823237.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3342018 - 3342920 bp
Length : 903 bp
Strand : -
Note : KEGG: pmx:PERMA_0444 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGAAAAGTAAGACCATTCGCATTGGAACAAGAAGAAGCGCTTTGGCCGTGGCACAGGCGAACATAATGGCTGAGGCCCT
TGAAAGGACAGGTACTGGCCTGTCAGCGGAACTGGTGCTGAAACTGACGGAAGGAGACCGGATCCTGGATAAACCTCTTT
TGGAATTTGGTGGAAAAGGCGTATTTGTGACCGAATTTGAACAGGCCCTTTTAAGGGGAGAGATTGATTTCGCAGTCCAC
AGCGCAAAGGATCTTCCCATGGAGCTGGAAGAAGGCCTTGGAATTGTTGCAGTTTTGGAAAGGGAAGATCCCAGGGATGT
TCTGGTGACGCCGGCATCCGGTATTCTTTCCGGAAAAAGGGAAATCATAATCGGAACATCCAGCTTAAGAAGAAAGATTC
AGATTGAGGAAATCGGTAAGACCATGTGGCCGGAGGCATTGGTACGCTGTGAGAATTTAAGAGGCAATGTGCTCACCAGA
CTTTCAAAGCTCATGGAAGGCTCTTATGATGGCATCATACTGGCTGCTGCCGGGTTAAAACGGCTGGGGCTTTGGGAGGA
CAGCCGGTATCATTATCATTGCTTTGATTGTGATACCTTTATTCCGGCTGGAGGCCAGGGAATACTTGCCGTGGAAGGAC
GGCTGGATTCCGGGCTTGAGGCGGTGGTAAAATCTCTTGAGGATGAGGAAGCCAGGCTGTGCCTGACTATGGAACGAAAG
ATTTTAAAGCTGTTAAATGCCGGATGCCATGAGCCTATAGGTGTTTATTCCAGGCTTAAAAACGGGGAAATAGAGATTCT
TGGAATCAGCAGAAGAGGAGAAGAAGCAAAACGGATCCATCTGCGCGGAGGAATAGGGGAACTGGACAGGCTGGCCCTGC
TGGCAGCAGAGAGCCTTGGGTAA

Protein sequence : 
MKSKTIRIGTRRSALAVAQANIMAEALERTGTGLSAELVLKLTEGDRILDKPLLEFGGKGVFVTEFEQALLRGEIDFAVH
SAKDLPMELEEGLGIVAVLEREDPRDVLVTPASGILSGKREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTR
LSKLMEGSYDGIILAAAGLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVEGRLDSGLEAVVKSLEDEEARLCLTMERK
ILKLLNAGCHEPIGVYSRLKNGEIEILGISRRGEEAKRIHLRGGIGELDRLALLAAESLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-40 44
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-40 44