Gene Information

Name : Closa_2748 (Closa_2748)
Accession : YP_003822914.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2966400 - 2967083 bp
Length : 684 bp
Strand : +
Note : KEGG: ckr:CKR_3132 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAATTTATTAGACGTAACTGACGTTTGCAAGACCTATGGAAAAGGTGAAACTGCAGTCAATGCATTAAAAAACGTGAG
CTTTTCGGTTCCAAAAGGAGAATTTATTGCAGTTGTCGGGGAATCCGGTTCCGGAAAAAGCACACTGCTTAATATGATCG
GGGCGCTTGATACGCCTACATCCGGCAAGGTGCTGATTGACGGTAACGATATATTCAACATAAATGATGAAAAGCTCACC
ATTTTCCGACGCAGGAACATAGGCTTCGTTTTTCAGGCGTTCAATCTGATACCGGAACTCAATGTCGAGCAGAACATTAC
CTTCCCTGTTTTACTCGATTATAAGAAACCGGATCAGGCATATGTAGAAGAACTCCTTACGGTGCTGTCCTTAAAGGACA
GGCGCAATCACCTGCCACGCCAGTTATCCGGCGGACAGCAGCAGCGCGTAGCGATAGGCCGTGCTCTGATTGCACGCCCC
ATGCTGATTCTTGCGGACGAACCGACTGGAAATCTGGACAGTCAAAACAGCAGCGAGGTAATTTCGCTTCTGAAAACAGC
CTCCAAACGCTATCAGCAGACCATTATTATGATTACGCATAACCGAAGTCTTGCTTCCACGGCCGACCGCGTGTTACAAG
TATCGGACGGTGTACTCACAGACTTAGGGGGATACGCCGAATGA

Protein sequence : 
MNLLDVTDVCKTYGKGETAVNALKNVSFSVPKGEFIAVVGESGSGKSTLLNMIGALDTPTSGKVLIDGNDIFNINDEKLT
IFRRRNIGFVFQAFNLIPELNVEQNITFPVLLDYKKPDQAYVEELLTVLSLKDRRNHLPRQLSGGQQQRVAIGRALIARP
MLILADEPTGNLDSQNSSEVISLLKTASKRYQQTIIMITHNRSLASTADRVLQVSDGVLTDLGGYAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-39 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_2748 YP_003822914.1 ABC transporter CP001581.1.gene798.p Protein 5e-87 79
Closa_2748 YP_003822914.1 ABC transporter CP001581.1.gene598.p Protein 2e-56 53
Closa_2748 YP_003822914.1 ABC transporter NC_008702.1.4606598. Protein 1e-35 42
Closa_2748 YP_003822914.1 ABC transporter NC_012469.1.7686878. Protein 5e-40 41