Gene Information

Name : Closa_2154 (Closa_2154)
Accession : YP_003822356.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2320681 - 2321388 bp
Length : 708 bp
Strand : -
Note : KEGG: lsg:lse_0171 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGGAAGAACCCATAATTGAATTAAAAGATATCCATAAGGTATACCAGATGGGAGATGAGGAGGTACGTGCAAGTGACGG
AATATCTTTAACCATCTGCCGGGGGGAATTCGTGGCCATTGTGGGAAAGTCGGGAAGCGGAAAGTCCACGCTTATGAATA
TTATAGGTGCACTGGATGTTCCCACCTCAGGAGAGTATCTGCTGGGTGGTGAGGATGTAGGGAGCATGTCTGAAAACCAA
CTGGCTCAGATTCGGAATAGGATGATTGGCTTCATATTTCAGCAATACAATCTTCTGCCGAGATTAAATCTCCTGGAAAA
TGTGGAGCTGCCTCTTCTGTATGCAGGGATAGCTGCCAGTGAACGAAAAGAAAAGGCCATGAGTTCTTTAGAGCGTGTAG
GCTTGGCGGAAAAGTGGAAAAATCTGCCGAATCAGCTTTCCGGCGGCCAGCAGCAAAGGGTTTCCATAGCCAGGGCCCTG
GCAGGAGCCCCATCCCTGATTCTGGCTGATGAACCTACGGGAGCTTTGGACTCCAAAACAAGCCGGGATGTTTTAAACTT
TTTAAACAAGTTAAATGATGAAGGTAATACCATTGTTATGATTACCCATGACAGCACCATAGCAAGGGAAGCCCGGCGGG
TGGTCCGGGTACATGACGGAAAGATTAATTTCGACGGAGATGTAAATGAATATTCTGCAATCCTTTAA

Protein sequence : 
MEEPIIELKDIHKVYQMGDEEVRASDGISLTICRGEFVAIVGKSGSGKSTLMNIIGALDVPTSGEYLLGGEDVGSMSENQ
LAQIRNRMIGFIFQQYNLLPRLNLLENVELPLLYAGIAASERKEKAMSSLERVGLAEKWKNLPNQLSGGQQQRVSIARAL
AGAPSLILADEPTGALDSKTSRDVLNFLNKLNDEGNTIVMITHDSTIAREARRVVRVHDGKINFDGDVNEYSAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_2154 YP_003822356.1 ABC transporter NC_012469.1.7686878. Protein 1e-50 55
Closa_2154 YP_003822356.1 ABC transporter CP001581.1.gene798.p Protein 5e-38 48
Closa_2154 YP_003822356.1 ABC transporter NC_008702.1.4606598. Protein 6e-36 47
Closa_2154 YP_003822356.1 ABC transporter CP001581.1.gene598.p Protein 5e-37 44
Closa_2154 YP_003822356.1 ABC transporter NC_012469.1.7685735. Protein 7e-31 42
Closa_2154 YP_003822356.1 ABC transporter NC_012469.1.7686946. Protein 8e-28 41