Gene Information

Name : Closa_1797 (Closa_1797)
Accession : YP_003822003.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1930890 - 1931666 bp
Length : 777 bp
Strand : +
Note : KEGG: ele:Elen_2076 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATGGAAATTATGATCAGGCTTGAGGATGTGACTTATTCTTATAACAGGCAGCCGCTGATTCGTGAGATGGACTTAAC
TTTTGAAAAAGGAAAGATAACCACCATCGTCGGACCCAACGGATGCGGAAAAAGCACGGTGCTAAAGCTGGCTTCCCGGC
TTTTGCATCCAGATAAAGGGAAGGTGTTTCTGGGCAATAAAGAGATCAAAGCCATGAAGCGGAAAGAGTTTGCCAGGAAC
GTATCCATGCTGCTTCAAAGCAGCCATATACCGGATATGGCAGTGGAAGATGCGGTAATGGCAGGAAGATATCCCCATCA
GTCTCCCATCCGTTTCTCCTCTTATCAGGATAAACAGATGACGGAATATGCCATGCAAATGACTTGCTGCCAGTCGTTCC
GTAACAAAAACATACGACAGCTTTCCGGGGGAGAGCGTCAGCGCGTCTTTCTTGCCATGGTGCTGGCTCAGGATACGCCG
GTTATTATTCTCGATGAACCCACAACATATCTTGATATTCATGTGTCCTATGAAATTATGGAGCTTATCAGCAATTTAAA
CAGAAAGCTGGGCAAAACCATTGTTCTGGTTTTGCATGATCTTAATCTGGCTGTTAATTACTCAGACCGGCTAGCTGTGA
TGGAAAATGGGAGAGTGGTTGCTTTTGAGGAAGCTTCCGCCCCCAGGGTCCATAGCTGTATCCGTGATATTTTTCAAGTG
GATATCCGACGGCTGACAGAAAATGGGAGAACTTATTATTATTCTTTTAAAAGATAA

Protein sequence : 
MMEIMIRLEDVTYSYNRQPLIREMDLTFEKGKITTIVGPNGCGKSTVLKLASRLLHPDKGKVFLGNKEIKAMKRKEFARN
VSMLLQSSHIPDMAVEDAVMAGRYPHQSPIRFSSYQDKQMTEYAMQMTCCQSFRNKNIRQLSGGERQRVFLAMVLAQDTP
VIILDEPTTYLDIHVSYEIMELISNLNRKLGKTIVLVLHDLNLAVNYSDRLAVMENGRVVAFEEASAPRVHSCIRDIFQV
DIRRLTENGRTYYYSFKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-40 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-44 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_1797 YP_003822003.1 ABC transporter BAC0164 Protein 6e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_1797 YP_003822003.1 ABC transporter VFG1042 Protein 6e-41 44
Closa_1797 YP_003822003.1 ABC transporter VFG0925 Protein 6e-37 42