Gene Information

Name : Closa_1243 (Closa_1243)
Accession : YP_003821469.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1336787 - 1337581 bp
Length : 795 bp
Strand : +
Note : KEGG: aoe:Clos_0141 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGTGGAAAAAAAAGGATAAGCTTCCTGCCTGCGCTACGGAAAATATCATGGAAGATTTGATAAAGCTGGTGGATGTGGT
GAAGGTTTACGATACCGGTTCCATAAAGGTGCTGGGCTTAAAGCGGGTAAACTTAACCATTAAGCGGGGAGAATTTGTGG
CTATCATGGGGCAGTCAGGCTCTGGAAAGTCAACGCTCATGAATATTTTAGGGTGCCTGGACCGGCCTACCATGGGGCAT
TATTATCTTGACGGAATTGATACGGCAGAGCTTCCTGCCGATGATTTATCGGCAATCCGAAACCGGAAAATAGGATTTGT
CTTTCAGTCCTTTAATCTTATATCAAGGACCTCCGCACTGAAAAATGTGGAGCTTCCTATGACTTATGCCCATATCTCCA
GAAAGGCCAGGGAGGAGCGGGCGATCAAGCTTCTGGAGCGGGTAGGACTTGGAAGCCGTTATGAGCATATGCCCAATGAG
CTTTCCGGCGGTCAGCGGCAGAGAGTGGCCATAGCAAGAGCGCTGGCTAACGAGCCTCCTCTGATTCTGGCCGATGAGCC
TACGGGTAACTTGGATACCGCCTCATCAAAGGAGATTATGGAGCTGTTTACCAAGCTTCACAAAGAGGGAGCCACCGTGG
TGCTGGTAACCCATGAAGAGGATATTGCTGCATTTGCAGGGAGGATCATACGGTTTCGGGATGGGCAGCTGGTCAGCGAT
GAGCTTAATGTTCCCCTGAACCAGGGACCGGAAGAGTATGAGACTATGGAGAAAGAAGGGACGCCATGCTGTTAG

Protein sequence : 
MWKKKDKLPACATENIMEDLIKLVDVVKVYDTGSIKVLGLKRVNLTIKRGEFVAIMGQSGSGKSTLMNILGCLDRPTMGH
YYLDGIDTAELPADDLSAIRNRKIGFVFQSFNLISRTSALKNVELPMTYAHISRKAREERAIKLLERVGLGSRYEHMPNE
LSGGQRQRVAIARALANEPPLILADEPTGNLDTASSKEIMELFTKLHKEGATVVLVTHEEDIAAFAGRIIRFRDGQLVSD
ELNVPLNQGPEEYETMEKEGTPCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_1243 YP_003821469.1 ABC transporter NC_012469.1.7686878. Protein 4e-56 55
Closa_1243 YP_003821469.1 ABC transporter NC_008702.1.4606598. Protein 3e-43 48
Closa_1243 YP_003821469.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 45
Closa_1243 YP_003821469.1 ABC transporter CP001581.1.gene598.p Protein 2e-36 42