Gene Information

Name : Closa_1226 (Closa_1226)
Accession : YP_003821455.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1321518 - 1321973 bp
Length : 456 bp
Strand : +
Note : PFAM: transposase IS200-family protein; KEGG: cce:Ccel_3266 transposase IS200-family protein

DNA sequence :
ATGGCGAAGAAAGCCAATGAACTGGCACACACGAAATGGATGTGCAAATATCATATCGTCTTCACACCTAAGTATAGACG
AAAAGTAATTTATAATCAATACAAGGAAGATTTGAGAGAAGTCTTGAAGCAACTATGTAATTATAAGGGGGTCCAAATCT
TAGAAGGCCATATTATGCCGGATCATGTACATATGCTGGTAAGTATTCCGCCTAAAATTAGCATATCCAGTTTTATGGGT
TATCTGAAAGGCAAATCCGCCCTTATGATGTTTGATCGCCACGCAAACCTAAAGTATAAATTCGGAAACCGACATTTTTG
GTCGGAAGGATACTATGTAAGCACAGTAGGACTAAATGAGGACACCATCCGAAAATATATACAGGAGCAGGAAAAAGCGG
ATATTATGCAAGATAAACTAAGTGTAAAAGAATACGAGGACCCTTTTAAGGGTTAG

Protein sequence :
MAKKANELAHTKWMCKYHIVFTPKYRRKVIYNQYKEDLREVLKQLCNYKGVQILEGHIMPDHVHMLVSIPPKISISSFMG
YLKGKSALMMFDRHANLKYKFGNRHFWSEGYYVSTVGLNEDTIRKYIQEQEKADIMQDKLSVKEYEDPFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 8e-41 62
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 5e-41 62
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 2e-42 60
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 2e-43 58
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 1e-37 53