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Name : Closa_1198 (Closa_1198) Accession : YP_003821428.1 Strain : Clostridium saccharolyticum WM1 Genome accession: NC_014376 Putative virulence/resistance : Resistance Product : serine-type D-Ala-D-Ala carboxypeptidase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1876 EC number : 3.4.16.4 Position : 1294283 - 1295074 bp Length : 792 bp Strand : + Note : KEGG: efa:EF2297 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin DNA sequence : ATGGTTAATTGCAATAATAATTATAGCGGCTATAAGAGGAAACGAGCATTAAAACAACATTCACGCTTGAGAAAGAACCA TATGATATTGCGGCTGATCTCAGTAGCAGCTGTCATCGGTTTGCTTTGGTACTGCATCAATGGTTTGAATTTGAAAGAAG TTTCGCCTGAACCTATTTTATCCATTGGGACGGACAGTCCCGACATCAGTTCAGCCGACATTAAAAAAGATGATACGGAT GATCCTTTGTGGAGCTTGATTCTAGTCAATCGATGGAATGTGATTCCAGAGGATTACCACGTAGATTTGACCAAATTATC AAATGGACAAACTGTTGATACACGGATATACCCGGCACTTCAGAACATGTTTGATGCAGCAAGGGCTGACGGTGTAAATC TCGTGGTCGTTTCAGGATACCGAACGGCTGAGAAGCAGCAGAGCCTGATGGATGAAAAAGTTGCAGCATATAAAGCGGAA GGATATTCAGCCTACCAAGCAAAGACCGAAGCAGAAACATGGGTCGCGATTCCAGGTACAAGTGAACATCAGTTGGGAAT CGCTGTGGATATCAATGCGGATGGGGTTCAATCAAAGGGAAGTGAAGTTTATAAATGGCTGAAACAAAACGGATACCGTT TTGGATTTATCCTCCGCTATCCGCCGGATAAAACAGAAATCACTGGTGTGAGCAATGAGCCGTGGCATTACCGCTATGTA GGAATTAAGGCTGCCACTGAAATGAACGATCAAAACCTCTGCCTTGAGGAATATTTAAGAGATAAAAATTGA Protein sequence : MVNCNNNYSGYKRKRALKQHSRLRKNHMILRLISVAAVIGLLWYCINGLNLKEVSPEPILSIGTDSPDISSADIKKDDTD DPLWSLILVNRWNVIPEDYHVDLTKLSNGQTVDTRIYPALQNMFDAARADGVNLVVVSGYRTAEKQQSLMDEKVAAYKAE GYSAYQAKTEAETWVAIPGTSEHQLGIAVDINADGVQSKGSEVYKWLKQNGYRFGFILRYPPDKTEITGVSNEPWHYRYV GIKAATEMNDQNLCLEEYLRDKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanYB | NP_815954.1 | D-alanyl-D-alanine carboxypeptidase | Not tested | Not named | Protein | 1e-63 | 58 |
| vanYB | YP_008394256.1 | VanY protein, D-alanyl-D-alanine carboxypeptidase | Not tested | Not named | Protein | 1e-63 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Closa_1198 | YP_003821428.1 | serine-type D-Ala-D-Ala carboxypeptidase | U35369.1.gene3.p01 | Protein | 6e-64 | 58 |
| Closa_1198 | YP_003821428.1 | serine-type D-Ala-D-Ala carboxypeptidase | AE016830.1.gene2253. | Protein | 6e-64 | 58 |
| Closa_1198 | YP_003821428.1 | serine-type D-Ala-D-Ala carboxypeptidase | AF310956.2.orf2.gene | Protein | 7e-64 | 57 |
| Closa_1198 | YP_003821428.1 | serine-type D-Ala-D-Ala carboxypeptidase | AF253562.2.orf2.gene | Protein | 1e-41 | 46 |
| Closa_1198 | YP_003821428.1 | serine-type D-Ala-D-Ala carboxypeptidase | DQ212986.1.gene6.p01 | Protein | 2e-48 | 45 |
