Gene Information

Name : Bresu_1207 (Bresu_1207)
Accession : YP_003818142.1
Strain : Brevundimonas subvibrioides ATCC 15264
Genome accession: NC_014375
Putative virulence/resistance : Virulence
Product : ATPase, FliI/YscN family
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1217997 - 1219337 bp
Length : 1341 bp
Strand : +
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: cak:Caul_1023 flagellum-specific ATP synthase; SMART: ATPase AAA

DNA sequence :
ATGCGCAACCTGGTCGCCGCCGTCGAAGCCATCGATCCGCTGGTCGTCACCGGCAAGGTCGCGGGCGTGTCCGGGCTGCT
GATCGAGGCCAAGGGCGGGCTCAGCCGGCTGGCCGTCGGGGCCCGGGCCGAGATCGGGCGGCGGGGGACGACGCCGCTGC
CTGCCGAGGTCGTAGGCTTCCGCGATTCCAAGGCCCTGCTGATGCCGTTCGGGCCGGTCGAGGGCGTGGCCCCGGGGGCC
GACATCCACATCATCGGCCAGGCGGCCGCCGTCTATCCGACCACGGCCTGGCTGGGCCGGATCATCGACGCCTTCGGCCA
GCCGATCGACGGCAAGGGACCGCTGCCCCAGGGGCCTGCCCCCTATCCGCTGCGCGCGGCTCCACCCGCGGCCCACTCGC
GCGGCCGGGTGGGCGAAAGGCTGGATCTGGGCGTGCGGTCCATGGACGTCTTCACCACCACCTGCCGGGGCCAGCGGCTG
GGCATCTTTGCGGGATCGGGCGTCGGAAAGTCCGTGTTGCTGTCGATGCTGGCGCGCCAGGCAACCTGCGATGCCGTGGT
CGTCGGACTGATCGGCGAACGGGGCCGCGAGGTCCGCGAGTTCATCGAGGAGACCCTGGGCGAGGAGGGGCTGCGGCGCG
CCATCGTGGTCGTGGCGACCTCGGACGAGCCGGCGCTGAAGCGGCGCCAGGCGGCCTATATGACCATGGCGATCTCGGAA
TACCTGCGCGATCAGGATCTGGAGGTGCTGTGCCTGATGGACTCGGTGACGCGTTTCGCCATGGCCCAGCGCGAGATCGG
GCTGGCGGCGGGCGAACCGCCGACCACCAAGGGCTATACCCCGACCGTCTTTTCCGAACTGCCCAAGCTGCTGGAGCGGG
CCGGCCCCGGTCCGATCCGGCCGGATGGCACGACGGCGGCGCCGATCACGGCGATGTTCACCGTGCTGGTGGACGGCGGC
GACCACGACGAGCCGATCGCCGATGCCGTGCGCGGGATCCTGGACGGCCATATCGTGATGGATCGCAAGATCGCCGAGCG
CGGCCGCTTCCCCGCCATCGACGTGCTGAAGTCCGTCAGCCGCACCCTGCCGGGCTGTCAGACGCCGCCGGAGCGCGAGC
TGAACCGGCGGGCCCGCCAGTGCCTGAGCGCCTATTCCAGCATGGAGGAACTGATCAAGATCGGGGCCTACCGCGCCGGG
GCCGACCCCATCACCGACCGCGCCATCGCCCTCAATCCGGCGCTGGAAGCCTTCCTCGGCCAGGACAAGGACGACGTCAC
GCGGATGGCCGATTCCTTCAACCGGTTGGAAAGCATTCTGAACCAAGGTCTGCTGCAGTGA

Protein sequence :
MRNLVAAVEAIDPLVVTGKVAGVSGLLIEAKGGLSRLAVGARAEIGRRGTTPLPAEVVGFRDSKALLMPFGPVEGVAPGA
DIHIIGQAAAVYPTTAWLGRIIDAFGQPIDGKGPLPQGPAPYPLRAAPPAAHSRGRVGERLDLGVRSMDVFTTTCRGQRL
GIFAGSGVGKSVLLSMLARQATCDAVVVGLIGERGREVREFIEETLGEEGLRRAIVVVATSDEPALKRRQAAYMTMAISE
YLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFSELPKLLERAGPGPIRPDGTTAAPITAMFTVLVDGG
DHDEPIADAVRGILDGHIVMDRKIAERGRFPAIDVLKSVSRTLPGCQTPPERELNRRARQCLSAYSSMEELIKIGAYRAG
ADPITDRAIALNPALEAFLGQDKDDVTRMADSFNRLESILNQGLLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-70 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-70 47
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-76 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-67 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-67 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-69 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-76 44
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-76 44
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-75 44
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 44
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-75 44
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-76 44
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-76 44
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-67 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-61 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-63 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-64 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-64 42
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-61 42
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-61 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-62 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-62 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-67 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 5e-70 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-67 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-68 41
escN AAK26715.1 EscN Virulence LEE Protein 1e-63 41
escN AAL57542.1 EscN Virulence LEE Protein 1e-63 41
escN AAC31513.1 L0034 Virulence LEE Protein 1e-63 41
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-63 41
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-63 41
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-64 41
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-63 41
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-64 41
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-63 41
unnamed AAL06369.1 EscN Virulence LEE Protein 8e-63 41
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-64 41
escN AAC38383.1 EscN Virulence LEE Protein 2e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG1254 Protein 2e-78 47
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG0515 Protein 8e-71 47
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG0390 Protein 1e-75 47
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG2144 Protein 2e-80 46
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG2499 Protein 7e-79 46
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG0192 Protein 4e-75 45
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG0048 Protein 5e-77 45
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG2331 Protein 6e-72 43
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG0812 Protein 6e-64 41
Bresu_1207 YP_003818142.1 ATPase, FliI/YscN family VFG0730 Protein 1e-63 41