Gene Information

Name : smpB (HMPREF0659_A6784)
Accession : YP_003814825.1
Strain :
Genome accession: NC_014371
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 482303 - 482782 bp
Length : 480 bp
Strand : -
Note : identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086

DNA sequence :
ATGAATAAGGAACAACAAGAGAAAAGAAAGAAATCACCTATACAGATAAGAAACAAGAAAGCTTCTTTTGAATATTTCTT
CGTTGATACTTACACAGCAGGTATTGTTCTTACTGGCACGGAGATAAAGTCTATACGTGCTGGTAAGGCTTCGTTGGTTG
ATTCTTACTGCTATATAACAAAAGGTGAAATGTGGGTTCAGGGGATGAACATATCTCCTTATTTCTATGGTTCGTATGCC
AATCATGAGGCAAAACGTCCACGAAAGCTCCTATTGAACCGAAAAGAAATACGCAACCTTGAGGCTGACTCAAAGACTCC
TGGCTTCACCATTATTCCAACACTTATCTTTATCGATGAGAACGGACGAGCAAAGGTCGACATTGCCTTGGCAAGAGGTA
AGAAAGAATACGACAAACGCCAAACACTAAAAGAAAAAGAAGACCGACGAGAAATGGATCGGGCAAAGAAACATTATTAA

Protein sequence :
MNKEQQEKRKKSPIQIRNKKASFEYFFVDTYTAGIVLTGTEIKSIRAGKASLVDSYCYITKGEMWVQGMNISPYFYGSYA
NHEAKRPRKLLLNRKEIRNLEADSKTPGFTIIPTLIFIDENGRAKVDIALARGKKEYDKRQTLKEKEDRREMDRAKKHY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-26 48
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 6e-29 46