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Name : HMPREF0659_A5908 (HMPREF0659_A5908) Accession : YP_003813982.1 Strain : Genome accession: NC_014370 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1138020 - 1139294 bp Length : 1275 bp Strand : - Note : identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGAAAGTGGAAAATATTAAAATTGCCGTTATTGGCTTAGGTTATGTTGGCTTGCCTTTGGCAAGATTATTCTCAACAAA GTTTAAGACCGTTGGTTTTGATATGAATCAGGGTCGTGTTGATGCGTTAATGGCTGGTCATGATGCTACATTAGAAGTAT CAGATGAGTTATTACAGTCTGCTATAAAAAATGGTTTTCTTTGTACAACTAATCTGGAAGACATTAGAGACTGTAATTTC TATGTAGTTGCTGTACCAACACCTGTAGATGTAAACAATCGTCCTGACTTGAAGCCTCTTTGGGGTGCAAGTGAGACGGT TGGTAAAGTTATTTCTAAGGGAGACATTGTTGTTTACGAGTCAACAGTTTATCCAGGCGTAACGGAAGAAGAATGTTTAC CTGTAGTAGAGAAGGTTTCTGGCTTAACATTTAATAAAGACTTCTTTGCAGGTTATTCTCCTGAGCGTATAAACCCAGGC GATAAGGAGCATACTGTAGAGAAAATAAAAAAGGTAACATCAGGTTCTACTCCAGAGATTGCTGATTTGGTAGATAATGT GTATAATGCAGTTCTTATTAACGGAACACATAAAGCACCTTCTATAAAAGTAGCTGAAGCTTCAAAGATTATTGAAAACT CTCAACGTGACGTTAATATTGCGTTTATGAATGAGTTGGCTAAGATTTTCAATGCAATGGGTATCGATACAAGAGATGTA ATAGATGCTGCTGCTTCTAAGTGGAATTTTATTAAGTTGAATCCTGGTTTAGTTGGTGGTCATTGTATCAGTGTAGATCC TTATTATCTCATTCAAAAGGCACAGGTCTATGGAGTTTTGCCACGTATTATGTCTGCTGCACGTAGATTGAATGATGGTA TGGGAGATTACGTTGCAAATCAGACAATCAAGATGATGAATAAGAAGGGTGCACTCGTCAAGGATTCTAATATCTTGATA CTTGGTATCACCTTTAAGGAAAATTGTCCTGATGTACGTAATACTAAGGTTGTTGATATCTATTCTACATTGTCGGAATA CACTTCAAATATTACGGTCTTAGACCCATGGGCTAATGTTGAAAGAGTGAAGAAAGAATATGGGATTGATGCTGTCGCGT CTTTGCCTAAGGATAAGAAATATGATGCGATTATTCTTGCCGTTTCTCATAAGCAGTTTGCTGATACAGACTGGAGAGAG AAATTAAATGAGAATGGTGTTATTTATGATGTCAAAGGCTTCTTAAATAGAGATATTGTTGATGGACGACTATAA Protein sequence : MKVENIKIAVIGLGYVGLPLARLFSTKFKTVGFDMNQGRVDALMAGHDATLEVSDELLQSAIKNGFLCTTNLEDIRDCNF YVVAVPTPVDVNNRPDLKPLWGASETVGKVISKGDIVVYESTVYPGVTEEECLPVVEKVSGLTFNKDFFAGYSPERINPG DKEHTVEKIKKVTSGSTPEIADLVDNVYNAVLINGTHKAPSIKVAEASKIIENSQRDVNIAFMNELAKIFNAMGIDTRDV IDAAASKWNFIKLNPGLVGGHCISVDPYYLIQKAQVYGVLPRIMSAARRLNDGMGDYVANQTIKMMNKKGALVKDSNILI LGITFKENCPDVRNTKVVDIYSTLSEYTSNITVLDPWANVERVKKEYGIDAVASLPKDKKYDAIILAVSHKQFADTDWRE KLNENGVIYDVKGFLNRDIVDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-109 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-109 | 55 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-100 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0659_A5908 | YP_003813982.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 9e-110 | 55 |
