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Name : thiC (HMPREF0659_A5799) Accession : YP_003813878.1 Strain : Genome accession: NC_014370 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1005316 - 1006893 bp Length : 1578 bp Strand : + Note : identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190 DNA sequence : ATGAAAGCAGAATTCAAGTTTAGTTATCCTTCCTCTGAGAAGGTTTACCTAAGTGGAAAACTCTATCCTGAACTCAAAGT GGGAATGCGTAAAGTACATCTTACACCTACTGTTACTATCAAGAAAGGAGAAAGATGTGAGGAAAACAATGCTCCTGTGT ATATATATGATACCAGTGGTGCTTACAGTGATCCTAATATTGATATCAACTTAGAGTGCGGACTGCCTAAACTTCGACAG CCTTGGGTCATAAAACGTAAGGAAAGAGAGACCCAAATGTATTTCGCCAAACAGGGTATAATAACTGAAGAGATGGAATA TGTTGCCATCAGAGAGAATATGAATTGTGAGGAATTGGGTATCGACACGCGTATCACTCCAGCGTTTGTATGCAAGGAAA TTGCCGAAGGGAGGGCTGTAATACCTGCTAACAAAAAGCATCCAGAATCTGAACCGATGATTATCGGGACGAACTTTCTT GTGAAGATAAACGCCAATATCGGCAATTCCTCCACATCTTCTGATATCGAACAAGAGATTGAAAAGGCTGTTTGGAGTTG TAAATGGGGTTGCGATACATTAATGGATTTATCTACAGGTAAGGATATTCATGAGACACGAGAACGAATTCTTCGTAACT GTCCTGTACCAGTTGGGACTGTACCTATGTATCAAGCTTTTGAGAAAGTTAATGGGAAAATTGAAGCTCTTAACTGGGAA ATCTTCCGTGATACCTTAATTGAACAGTGCGAACAAGGAGTGGATTACTTTACAATTCATTGTGGCATACGATTAAAGAA TATACATCTTGCTGACAATCGATTGACAGGTATCGTAAGTCGTGGCGGTAGTATTATCTCTAAATGGTGTAAGGAACATC AGAAAGAGAGTTTCCTCTATGAACATTTTGATGATATATGTGATATCTGTGCAAGGTATGATGTTGCTATATCGTTGGGA GACGGACTACGTCCTGGTTGTACGCACGATGCGAATGATGCGGCTCAATTTGCTGAACTTGACACGATGGGCGAATTAGT TGAGCGTGCATGGGATAAGAATGTACAGGTCTTTATTGAAGGTCCTGGTCATGTTCCAATGCATAAAATCAAGGAGAATA TGGAACGACAGATTAATAAGTGCCATGGTGCACCCTTCTATACATTAGGTCCACTTGTCACAGATATTGCACCAGCATAC GACCATATCACTTCTGCTATTGGTGCATCTCTCATTGGATGGTATGGAACAGCCATGCTATGTTATGTAACACCAAAGGA ACATCTTGCCCTACCTGAGAAAGAAGATGTACGTATTGGTGTCATCACTTATAAGATAGCTGCCCACGCAGCAGACCTTG CAAAGGGACATCCAAGTGCTTCTATCCGTGATAATGCATTGAGTAAAGCACGTTACGACTTTCGTTGGAAAGACCAGTTT AACTTAGCACTCGACCCTGAGCGTGCGCTTGAATATTACAAAGCAAGCAACTCTGTTGATGCAAACTATTGTACAATGTG CGGTCCACATTTCTGTGCTGCACGTATAAGTCATTCTCTCAAGGACTGTGAGGAATAA Protein sequence : MKAEFKFSYPSSEKVYLSGKLYPELKVGMRKVHLTPTVTIKKGERCEENNAPVYIYDTSGAYSDPNIDINLECGLPKLRQ PWVIKRKERETQMYFAKQGIITEEMEYVAIRENMNCEELGIDTRITPAFVCKEIAEGRAVIPANKKHPESEPMIIGTNFL VKINANIGNSSTSSDIEQEIEKAVWSCKWGCDTLMDLSTGKDIHETRERILRNCPVPVGTVPMYQAFEKVNGKIEALNWE IFRDTLIEQCEQGVDYFTIHCGIRLKNIHLADNRLTGIVSRGGSIISKWCKEHQKESFLYEHFDDICDICARYDVAISLG DGLRPGCTHDANDAAQFAELDTMGELVERAWDKNVQVFIEGPGHVPMHKIKENMERQINKCHGAPFYTLGPLVTDIAPAY DHITSAIGASLIGWYGTAMLCYVTPKEHLALPEKEDVRIGVITYKIAAHAADLAKGHPSASIRDNALSKARYDFRWKDQF NLALDPERALEYYKASNSVDANYCTMCGPHFCAARISHSLKDCEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-161 | 58 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-161 | 58 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-155 | 54 |
