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Name : nifJ (HMPREF0659_A5561) Accession : YP_003813668.1 Strain : Genome accession: NC_014370 Putative virulence/resistance : Virulence Product : pyruvate synthase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 740820 - 744395 bp Length : 3576 bp Strand : - Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGGCTAAAGAAAAGAAGTTTATCACTTGTGATGGTAACGAGGCCGCTGCTCACGTGAGCTACATGTTCTCTGAGGTAGC AGCTATCTATCCTATCACTCCATCATCTCCAATGGCTGAGCACGTAGACGAGTGGTCAGCACGTGGTCGTAAGAACCTTT GGGGTCAGACAGTAAGCGTTCAGGAGATGCAGTCAGAGGGTGGCGCAGCAGGTGCCGTACACGGTTCACTGCAGTCTGGT GCTCTCACGACAACCTTCACCGCATCACAGGGTCTTCTCTTGATGATTCCTAACATGTACAAGATTGCTGGTGAACTTTT GCCATGTGTATTCAATGTTTCAGCACGTACACTCGCAAGTCACGCTCTTTGTATCTTCGGTGACCACCAGGACGTAATGG CTTGCCGTCAGACAGGTTTCGCTATGTTCTGTTCAGGTTCTGTTCAGGAGGTTATGGACCTCTCTGCAGTTCCTCACCTT GCTTCATTGAAGACATCAGTACCATTCATCAACTTCTTCGATGGTTTCCGTACATCACACGAGTATCATAAGATTGAGTG CCTTGACCAGGAAGATATCCGTCCATTGGTTGACGAGGAAGATATTAAGCGTTTCCGCGATCGCGCAATGACTCCAGAGC GTCCAGTAGTTCGTGGTACAGCTGAGAACCCTGAGACATTCTTCACACATCGTGAGGCATCTAACAGTGCTTACGAGAAT GTAGCAGAGGTTGTTGAACATTATCTCGGCGAAATCTCAAAGATTACAGGCCGTGAGTATCACCTCTTCGATTACTATGG TGCTAAGGATGCAGAGAACATTATCATCTTGATGGGTTCAGCTACTGAGGCAGCTCGTGAGGCTATCGACTACTTGATGT CTCAGGGTAAGAAGGTTGGTATGATTGCTGTACACCTCTATCGTCCATTCTCAGTTAAGCACTTGCTCGCTGCAGTACCA AAGTCTGTTAAGCGTATCGCTGTTCTTGACCGTACTAAGGAACCAGGAGCAGAGGGTGAGCCATTGTACCTCGATGTTAA GAGTGCATTCTATGATGTTGAGAACAAGCCATTGATCGTTGGTGGTCGTTATGGTCTCGGTTCTTCAGATACAACACCAG CTAAGATTATCGCTGTTTATGACAACCTCGAGTTGCCAGAGCCAAAGAATCACTTCACTGTAGGTATCGTTGATGACGTA ACCTTCACTTCTCTCCCAGAGGTTGAGGAGATTCCATTGGGTGGTGAAAGCACATACGAGGCTAAGTTCTATGGTCTTGG TGCTGACGGTACCGTTGGTGCTAACAAGAACTCAGTAAAGATTATCGGTGACAACACTAATAAGTACTGTCAGGCTTACT TCTCTTATGACTCTAAGAAGTCTGGTGGTTTCACTTGTTCTCACCTCCGCTTCGGTGATAATCCAATCCGTTCTACTTAT CAGGTAAATACACCTAACTTCGTAGCTTGTCACGTTCAGGCTTACTTGAACATGTACGACGTTACACGTGGTTTGCGTAA GAATGGTACATTCTTGTTGAACACTATCTTTGATGGTGAGGAACTTGTACACTTCATTCCTAATAAGGTTAAGCGTTACT TCGCAAAGAACAATATCAGCGTTTACTATATCAACGCTACTAAGATTGCACAGGAGATTGGTCTTGGCAACCGTACCAAT ACTATCCTCCAGTCTGCATTCTTCCGTATTACTGAGGTAATTCCTCTCGACCTTGCTGTTGATCAGATGAAGAAGTTCAT CGTTAAGAGTTACAGTAAGAAGGGTCAGGACGTTGTAGACAAGAACTTCGCTGCTGTTGATCGTGGTAACGAGTACAAGC AGTTAACTGTTGACCCAGCATGGGCTAACCTCTCTGATGACGATGCTAAGGTAGACGATGCACCAGCATTCGTTAAGGAA CTTGTTCGTCCAATGAACGCACAGGCAGGTGACCTCTTGAAGGTTTCTGACTTCGTTAATCATGGTACTGTTGACGGTAC ATGGTCAGTAGGTACAGCAGCTTTCGACAAGCGCGGTGTTGCTACCTTCGTTCCAAAGTGGGATGCAGAGAACTGTATCC AGTGTAACAAGTGTTCATACGTTTGTCCTCACGCTTGTATCCGTCCATTCGTATTGGATGAGGCTGAGAAGGCTAACTTC AACGAAGAGACACTCGACGTCATCGCTCCAAAGCAGCTCAAGGGAATGCAGTTCCGTATTGAGGTGTCAGTTCTCGACTG TACAGGTTGTAGCAACTGTGCTGATGTATGTCCAGGTAAGAAGGGTAACAAGGCTCTCTCTATGACTCAGTTCGTTGCTG GAGAGGAAGAGGCTAACCACCGTGCAGCTAACTGGAATTACCTCGTTAAGAACGTTAAGAGCAAGCAGAACTTGGTAGAC ATCAAGTCAAATGCTAAGAACTCTCAGTTCGCTCAACCTTTGTTCGAGTTCTCTGGTGCTTGTGCTGGTTGTGGTGAGAC TCCATACGTTAAGCTTGTTTCACAGCTCTTCGGTGATCGTGAGATGATTGCTAATGCTACTGGTTGTTCTTCAATCTACT CAGCTTCAGTTCCTTCTACTCCTTACACAACTAATGAGGAAGGTCATGGTCCTGCATTCAATAACTCACTGTTCGAGGAC TTCTGTGAGTTTGGTATGGGTATGGCTATGGGTAATAAGAAGATGCGCGAGCGTATCGCTGTACTTCTTAACGAATCTAT GGCTAACGACCATACACCTGCAGAATTCAAGGAGGCTGCTCAGGAGTGGCTTGATAACATGAATGATGCAGATGCATCTA AAGTTGCTGCTGCTAAGCTGAAGCCATTGATCGCTGCTGGTGCTGAAAAGGGATGCCCTGTATGTGCAGAGCTGAAGACA CTCGACCACTATCTCGTTAAGCGCAGCCAGTGGATTATTGGTGGTGATGGTGCTTCTTACGATATCGGTTACGGTGGTCT CGACCACGTTATCGCTTCTGGTGAGGACGTTAACATCTTGGTTCTTGATACTGAGGTTTACTCTAACACTGGTGGTCAGA GTTCTAAGGCTACTCCACTCGGTGCTATTGCTCAGTTCGCAGCTAAGGGTAAGCGTATCCGCAAGAAGGACCTCGGTTTG ATGGCAACTACATATGGTTACGTTTACGTAGCTCAGATTGCTATGGGTGCTGACAATGCACAGACATTGAAGGCTATCCG TGAGGCTGAGGCTTATCCTGGACCATCACTCATCATCGCTTACTCTCCATGTATCAACCATGGTTTGAAGGTGAAGGGCG GTATGGGTCGTAGCCAGGCTCAAGAAGCAAATGCTGTTGCTTGTGGTTACTGGCAGCTCTGGCGTTACAACCCACTGTTG GCTGAAGAGGGTAAGAACCCATTCTCACTCGATTCTAAGGAACCAGAATGGGATAAGTTCCAAGACTTCCTTCACAGTGA GGTTCGTTTCCTCTCTGTCCTCAAGGCTTATCCAAATGAGGGCGAGGAGCTCTTCAAGGCTTGTGAGGATATGGCTAAGC TCCGTTACAAGAGCTATGTTCGCAAAACTCAGGAAGACTGGAGCGAGGAGGCATAA Protein sequence : MAKEKKFITCDGNEAAAHVSYMFSEVAAIYPITPSSPMAEHVDEWSARGRKNLWGQTVSVQEMQSEGGAAGAVHGSLQSG ALTTTFTASQGLLLMIPNMYKIAGELLPCVFNVSARTLASHALCIFGDHQDVMACRQTGFAMFCSGSVQEVMDLSAVPHL ASLKTSVPFINFFDGFRTSHEYHKIECLDQEDIRPLVDEEDIKRFRDRAMTPERPVVRGTAENPETFFTHREASNSAYEN VAEVVEHYLGEISKITGREYHLFDYYGAKDAENIIILMGSATEAAREAIDYLMSQGKKVGMIAVHLYRPFSVKHLLAAVP KSVKRIAVLDRTKEPGAEGEPLYLDVKSAFYDVENKPLIVGGRYGLGSSDTTPAKIIAVYDNLELPEPKNHFTVGIVDDV TFTSLPEVEEIPLGGESTYEAKFYGLGADGTVGANKNSVKIIGDNTNKYCQAYFSYDSKKSGGFTCSHLRFGDNPIRSTY QVNTPNFVACHVQAYLNMYDVTRGLRKNGTFLLNTIFDGEELVHFIPNKVKRYFAKNNISVYYINATKIAQEIGLGNRTN TILQSAFFRITEVIPLDLAVDQMKKFIVKSYSKKGQDVVDKNFAAVDRGNEYKQLTVDPAWANLSDDDAKVDDAPAFVKE LVRPMNAQAGDLLKVSDFVNHGTVDGTWSVGTAAFDKRGVATFVPKWDAENCIQCNKCSYVCPHACIRPFVLDEAEKANF NEETLDVIAPKQLKGMQFRIEVSVLDCTGCSNCADVCPGKKGNKALSMTQFVAGEEEANHRAANWNYLVKNVKSKQNLVD IKSNAKNSQFAQPLFEFSGACAGCGETPYVKLVSQLFGDREMIANATGCSSIYSASVPSTPYTTNEEGHGPAFNNSLFED FCEFGMGMAMGNKKMRERIAVLLNESMANDHTPAEFKEAAQEWLDNMNDADASKVAAAKLKPLIAAGAEKGCPVCAELKT LDHYLVKRSQWIIGGDGASYDIGYGGLDHVIASGEDVNILVLDTEVYSNTGGQSSKATPLGAIAQFAAKGKRIRKKDLGL MATTYGYVYVAQIAMGADNAQTLKAIREAEAYPGPSLIIAYSPCINHGLKVKGGMGRSQAQEANAVACGYWQLWRYNPLL AEEGKNPFSLDSKEPEWDKFQDFLHSEVRFLSVLKAYPNEGEELFKACEDMAKLRYKSYVRKTQEDWSEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 55 |
