Gene Information

Name : gpmI (HDN1F_07300)
Accession : YP_003809973.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : phosphoglyceromutase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0696
EC number : -
Position : 894788 - 896383 bp
Length : 1596 bp
Strand : -
Note : silverDB:HdN1F945

DNA sequence :
ATGCCCCAGTCAACCGGAAACCAGAGCGCTGTAAACCCATCCAACGCTCTCGACAAAACCTCAGCACGCAAACCCCACGT
ACTGATCATTCTGGATGGTTTTGGCTACCGCGAAGAAACCGACTTCAACGCCGTAGCGAACGCTCGCAAACCTACTTGGG
ACAAACTCTGGAGCACGCGCCCTCACACCCTGATTTCCGGTTCCGGCATGGATGTAGGGCTCCCCGATGGCCAAATGGGC
AATTCTGAAGTGGGCCATATGAACCTCGGTGCGGGCCGCGTGGTATATCAGGATTTTACCCGCATCACCAAGGCCATCCG
CGACGGCGACTTTTTTAACAATCCAGTGCTTTGCAATGCCGTCGATGCGGCAGTGAACAAAGGCACCGCAGTACATATTA
TGGGGCTGCTCTCCCCAGGCGGCGTCCACAGCCACGAAGATCACATCGTTGCCATGGTCGAACTCGCGGCACAGCGTGGC
GCAAAGCAAGTCTACGTGCATGCGTTTCTGGACGGCCGCGACACGCCGCCCAAATCCGCCGCTCCCTCCATCGCCAAGCT
CGACGACTGTCTGCACAAAGCGGGCGTTGGCCGCATCGCCAGCGTTTCGGGCCGCTATTTTGGAATGGATCGGGATAACC
GCTGGGATCGCGTTTCTGCCGCCTACCACCTAATCACCTTGGGCGAAGCCGATTACGTAAGCACGACCGCAGCCGAGGCG
CTCGCGGCAGCTTATGAACGCGGCGAAACAGATGAGTTTGTGAAACCGACCCGCATCGTTGGCGCCAACGAGACTCCTGC
ATATGTGCAGGATCAAGACGCACTGATCTTTATGAACTTTCGCGCCGATCGCGCCCGCCAGATCAGCCGCAGCTTTTTGA
TCGACGACTTTAGTGGCTTTGAACGCAAAGCTCGCCGGAAGCTCGCCGATTTCGTCATGCTAACCGAATACGCAGCCGAC
ATTCCCGCACACTGCGCCTACCCGCCATTCGCGCTGACCAACACGCTGGGGGAATATCTTGCAAGCATGGGCAAAACCCA
GCTTCGCACGGCGGAAACTGAAAAATACGCGCACGTCACCTTTTTCTTTAGCGGCGGACGTGAAGCGTTATACGAAGGCG
AAGAGCGCAAGCTAATCCCCTCCCCCCAAGTCGCCACCTACGATCTGCAACCGGAGATGAGTGCACCTGCACTGACGGAC
GCAATGGTCGACGCCATCTTGAGCGGGCGTTATGATGTGATCGTCTGCAACTACGCAAACGGCGACATGGTGGGGCATAC
TGGCGTTTATGAAGCGGCAATCAAAGCGGTAGAAACTTTGGATACCTGCCTTGGTCGTATTGTAGACGCGCTTGAAAAAG
TCGGCGGCGAATGCTTGATTACCGCCGATCACGGCAACTGCGAGCAGATGCTGGATACCGTCAACCATCAGCCGCATACT
GCGCACACGACAGACCTTGTGCCATTGATCTATGTTGGCAAGAAAGCCCTGCAACTGCAGGCAGAAGGTGGCGTGCTCTC
CGATATTGCGCCTACACTACTGAAATTGATGGATCTTCCCCAACCTCCAGAAATGACAGGCAAAGCCTTATTCTGA

Protein sequence :
MPQSTGNQSAVNPSNALDKTSARKPHVLIILDGFGYREETDFNAVANARKPTWDKLWSTRPHTLISGSGMDVGLPDGQMG
NSEVGHMNLGAGRVVYQDFTRITKAIRDGDFFNNPVLCNAVDAAVNKGTAVHIMGLLSPGGVHSHEDHIVAMVELAAQRG
AKQVYVHAFLDGRDTPPKSAAPSIAKLDDCLHKAGVGRIASVSGRYFGMDRDNRWDRVSAAYHLITLGEADYVSTTAAEA
LAAAYERGETDEFVKPTRIVGANETPAYVQDQDALIFMNFRADRARQISRSFLIDDFSGFERKARRKLADFVMLTEYAAD
IPAHCAYPPFALTNTLGEYLASMGKTQLRTAETEKYAHVTFFFSGGREALYEGEERKLIPSPQVATYDLQPEMSAPALTD
AMVDAILSGRYDVIVCNYANGDMVGHTGVYEAAIKAVETLDTCLGRIVDALEKVGGECLITADHGNCEQMLDTVNHQPHT
AHTTDLVPLIYVGKKALQLQAEGGVLSDIAPTLLKLMDLPQPPEMTGKALF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00298 YP_008207763.1 Phosphoglyceromutase Not tested AbaR25 Protein 3e-149 64
BJAB0868_00302 YP_008211628.1 Phosphoglyceromutase Not tested AbaR26 Protein 3e-149 64