|
Name : tktA (HDN1F_36460) Accession : YP_003812856.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 4396105 - 4398099 bp Length : 1995 bp Strand : - Note : silverDB:HdN1F4856 DNA sequence : ATGTCTAGCCGCCGTGATCTTGCCAACGCCATACGCGCTCTGAGTATGGATGCCGTCCAGAAAGCCAAATCTGGCCACCC TGGAATGCCAATGGGCATGGCCGACATTGCCCAAGTGCTTTGGGCCGACTATCTGCGCCACAATCCAGCCAATCCAGAAT GGTCGGACCGCGACCGCTTTGTGCTCTCCAACGGCCACGGCTCTATGCTGCTGTATTCGCTTCTGCATCTGACCGGCTAC GATGTGAGCATCGACGACCTCAAAAACTTTCGCCAACTGCACGCCAAAACCGCCGGCCATCCCGAATACGGCTATTGCCC CGGCGTAGAAACCACCACCGGCCCATTGGGGCAGGGGATTGCCAATGCCGTAGGCTTTGCACTGGCCGAGAAGATTCTGG GGGCGCATTTCAACCGCGATGGCTATTCGATCGTCGACCACTTTACCTACGTGTTCTTGGGAGATGGCTGCTTGATGGAA GGAATTTCCCACGAAGTATGCTCTTTGGCGGGAACCTTGGGCCTTGGTAAATTAATCGTGTTTTACGATGACAACGGCAT TTCCATTGATGGTGAGGTAGAAGGTTGGTTTACCGACAACACGCCCAAGCGTTTTGAAGCCTATGGCTGGCAGGTGATTC CACAAGTAGATGGGCACGATCCTGATCAGATTCGCGCGGCGATTGAAATGGCGCGCACCAATACCGAACATCCCACGTTG ATTTGTTGCAAAACCATCATCGGCTACGGTTCCCCCAATAAGCAGGGCAAAGAAAGCAGCCACGGCGCGCCGTTAGGCGA TGATGAAATCGCACTAACGCGCAATCAGATTGGCTGGGCGCACGCGCCGTTTGAAATTCCGGATGACATTCGCGCCACTT GGGATGCGCGTGATTCAGGTGCAAAACGCGAGCGTGAATGGAACCAACTCTTTGGCCGTTATGCGAGCGCTTATCCTGAA CTTGCCGCCGAGTTCAGCCGCCGTATGGCCAATGAATTACCCGCAAATTGGAATGAAAAATCCGCGGCCTATATCCGCGA ACTGCAATCCAAAGGTGAGACAATCGCCAGCCGCAAGGCCTCGCAAAACACCCTCAATGCCTTCGGCCCGATGCTGCCGG AATTGCTCGGTGGTTCAGCCGATTTGGCAGGTTCCAACTTGACTTTGTGGAAGGGCTGCAAGGGCGTAAGCCGCGAGGAC GCGAGCGGCAATTATATTTATTACGGTGTGCGCGAATTTGGCATGACGGCCATTTGTAACGGCCTGACCTTGCACGGCGG ATTTATTCCTTACGGCGCTACCTTTTTGGTGTTTATGGAATACGCGCGTAACGCCATGCGTATGGCGGCGCTCATGAAAC AGCGCAATATCCAAGTTTATACTCATGATTCCATCGGCCTCGGTGAAGATGGCCCCACACACCAGCCCATCGAACAAATC GCCAACTTGCGCGGTACACCCAATATGTCGCTCTGGCGTCCGTGCGATGCGGTGGAATCTGCGGTAGCGTGGAAGGCGGC GATTGAGCGCAAAGATGGCCCGACGGCGCTGATCTTTTCGCGCCAAAATCTGCCGCATCAGGCGCGCAGTGAGCAGCAGT TGGCGGATGTGGCCAAGGGCGGCTATGTACTGCGGGCGATCAACGGCACGCCAGATGCTATTTTGCTAGCCACGGGCTCT GAAGTCTCGCTGGCGATGGATGCCGCTGAACAACTTGCTGGCAAAGGCAAAAACGTTTCGGTGGTGTCTATGCCGAGCGT TGATCTATTCCTCGCCCAATCGCGCGAATATCAGGAATCCGTATTGCCAGCAGCCGTGCGCCGTCGCGTTGCAGTAGAAG CAGCGCACGCTGATTATTGGTTTCGCTTTGTGGGTTTGGACGGTGCAGTGGTAGGCATGACCACGTTTGGAGAATCCGCG CCTGCGGACGCGCTCATGAAACATTTTGGTTTTACCGTAGAGAATGTGGTCGCTGCGGTTGAAAAACTGTTCTGA Protein sequence : MSSRRDLANAIRALSMDAVQKAKSGHPGMPMGMADIAQVLWADYLRHNPANPEWSDRDRFVLSNGHGSMLLYSLLHLTGY DVSIDDLKNFRQLHAKTAGHPEYGYCPGVETTTGPLGQGIANAVGFALAEKILGAHFNRDGYSIVDHFTYVFLGDGCLME GISHEVCSLAGTLGLGKLIVFYDDNGISIDGEVEGWFTDNTPKRFEAYGWQVIPQVDGHDPDQIRAAIEMARTNTEHPTL ICCKTIIGYGSPNKQGKESSHGAPLGDDEIALTRNQIGWAHAPFEIPDDIRATWDARDSGAKREREWNQLFGRYASAYPE LAAEFSRRMANELPANWNEKSAAYIRELQSKGETIASRKASQNTLNAFGPMLPELLGGSADLAGSNLTLWKGCKGVSRED ASGNYIYYGVREFGMTAICNGLTLHGGFIPYGATFLVFMEYARNAMRMAALMKQRNIQVYTHDSIGLGEDGPTHQPIEQI ANLRGTPNMSLWRPCDAVESAVAWKAAIERKDGPTALIFSRQNLPHQARSEQQLADVAKGGYVLRAINGTPDAILLATGS EVSLAMDAAEQLAGKGKNVSVVSMPSVDLFLAQSREYQESVLPAAVRRRVAVEAAHADYWFRFVGLDGAVVGMTTFGESA PADALMKHFGFTVENVVAAVEKLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 69 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 64 |
