Gene Information

Name : gspG (HDN1F_34710)
Accession : YP_003812686.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4217505 - 4217930 bp
Length : 426 bp
Strand : +
Note : silverDB:HdN1F4621

DNA sequence : 
ATGCAAAAAATGAGCAGCCGAGCCCGCGTGAGCGGTTTTACCTTGATTGAAGTGATGGTAGTGGTTGTCATTCTTGGCAT
CCTTGCAGGCCTTGTGGTCGTGAGCGTTGCGGGCAACACCGATAAAGCACGCGCAACCGCAGCGCGAAGCGACCTTGCTG
CAATTTCACAAGCGCTGGATCTCTACAAACTTGATAACTTCAACTATCCAACCACTGATCAGGGATTGGAAGCCCTCGTG
CACGCTCCGGATGGCGCGCGCAATTTCCCGCAGGGCGGCTATTTGAAAAAACTACCGATCGACCCGTGGGGCCATCCTTA
TCAATACTTTTCACCGGGCTCAAATGGCCCCTACGATTTGCTTTCTTACGGTGCAGACGGTGTGGAAGGCGGTGAAGGGG
TAGGAGAGGATATCGTGCTTGAGTAG

Protein sequence : 
MQKMSSRARVSGFTLIEVMVVVVILGILAGLVVVSVAGNTDKARATAARSDLAAISQALDLYKLDNFNYPTTDQGLEALV
HAPDGARNFPQGGYLKKLPIDPWGHPYQYFSPGSNGPYDLLSYGADGVEGGEGVGEDIVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 8e-17 58
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-17 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_003812686.1 general secretion pathway protein G VFG0180 Protein 2e-21 63
gspG YP_003812686.1 general secretion pathway protein G VFG2050 Protein 3e-17 57
gspG YP_003812686.1 general secretion pathway protein G VFG1871 Protein 7e-13 55