Gene Information

Name : HDN1F_34220 (HDN1F_34220)
Accession : YP_003812637.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.5
Position : 4157021 - 4157722 bp
Length : 702 bp
Strand : -
Note : silverDB:HdN1F4558

DNA sequence :
ATGGCTGGTTTCGACAAGGTAGTGAAAAACTACGATGAAGCCCTTGCAGGCTTGCAAGACGGCATGACCGTAATTGCGGG
CGGCTTTGGACTTTGCGGCATCCCTGAAGGCTTGATCGCACAAATCCGCAAAATGGGTACACGCGATCTCACCTTTGTAT
CGAATAACTGTGGAGTCGATGATTTCGGTTTGGGCGTTCTGCTTGCCGGTAAGCAAATTCGCAAAATGGTTTCCTCCTAT
GTTGGCGAGAACAAGCTATTCGAAGAACAACTGCTGGCGGGCGAACTTGAGGTGGAATTGGTTCCACAAGGCACACTTGC
AGAAAAAATGCGCGCAGGTGGTGCCGGCATTCCCGCATTTTTCACCGCAACCGGCTACGGCACGCTCGTGGGTGAAGGCA
AAGAAGTGCGCGAATTTGATGGCCGTCACTACATTATGGAGCGCTCCATTGTAGGTGATTTTGCCATCGTGAAGGCGTGG
AAAGGCGACCGTTACGGCAACCTTGTGTACCGCAATACCGCGCGTAACTTTAACCCGATGGCTGCCACCGCAGGCAAGAT
CACTGTGGTCGAAGTCGAAGAAATCGTGGAGCCGGGCGAACTCGATCCTAACGAGATTCACACGCCTGGAATTTATGTGA
ACCGCCTGATTCAAGGTAGCTTTGAAAAGCGCATCGAACGTCGCACCCTTCGCGCCGACTAA

Protein sequence :
MAGFDKVVKNYDEALAGLQDGMTVIAGGFGLCGIPEGLIAQIRKMGTRDLTFVSNNCGVDDFGLGVLLAGKQIRKMVSSY
VGENKLFEEQLLAGELEVELVPQGTLAEKMRAGGAGIPAFFTATGYGTLVGEGKEVREFDGRHYIMERSIVGDFAIVKAW
KGDRYGNLVYRNTARNFNPMAATAGKITVVEVEEIVEPGELDPNEIHTPGIYVNRLIQGSFEKRIERRTLRAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 8e-30 44