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Name : kdsB (HDN1F_33160) Accession : YP_003812532.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 4036266 - 4037048 bp Length : 783 bp Strand : + Note : silverDB:HdN1F4422 DNA sequence : GTGCCTAACGTGACTTCCTTTGTCGTGGTGATTCCCGCCCGTTTTGCTTCCACTCGGTTGCCCGCCAAACCGCTTGCCGA TATTGCTGGCAAGCCCCTGATACAATGGGTGTATGAACAGGCGCGCAAGAGCGAAGCGCAACGCGTAATTATTGCGACCG ACGATGCGCGCATCGAAACTGCAGCGCGTGCATTTGGCGCTGAAGTAGTCATGACGCGCGCGACCCATGAGTCAGGCACG GATCGCATCCAAGAGGTTGCCAGTCAACTCGGCTTGAGCAACGATATGATCATCGTCAACGTGCAGGGCGATGAACCCAT GATTCCGCCTGCGCTGATCAATCAGGTCGCAGAAAATCTCACACAATCCGGCGCACCTATGGCTACCTTGTGTGAACCCA TACAACATTACAACGAAATCACTAACCCGAATGTGGTAAAAGTAGTGATGGATTGTCGTGGAATGGCGCTGTATTTTAGC CGCGCAATGGTGCCTTTCGATCGTGATCGCTTTTCTGCAGGTGTAGACGAGAAAACCGAACTGACCGGTTGGTACCGGCA TTTAGGAATTTATGCATACCGAAAATCACTGCTCGATCAATTCGTCAATTGGGGGCCGTGCTTGCTCGAACAAACCGAAA AGCTCGAACAGTTGCGCGCACTCTGGCATGGCGTTTTGATTCATGTCGCACCCGCTGAAGAAGCTCTGCCACCAGGCGTA GACACGCCCGCAGACCTTGAGCGAATCCGCGCCATTTTAGGCGCGCGAGTAGCGCAGAACTAA Protein sequence : MPNVTSFVVVIPARFASTRLPAKPLADIAGKPLIQWVYEQARKSEAQRVIIATDDARIETAARAFGAEVVMTRATHESGT DRIQEVASQLGLSNDMIIVNVQGDEPMIPPALINQVAENLTQSGAPMATLCEPIQHYNEITNPNVVKVVMDCRGMALYFS RAMVPFDRDRFSAGVDEKTELTGWYRHLGIYAYRKSLLDQFVNWGPCLLEQTEKLEQLRALWHGVLIHVAPAEEALPPGV DTPADLERIRAILGARVAQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-44 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-43 | 44 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-43 | 44 |
