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Name : HDN1F_31210 (HDN1F_31210) Accession : YP_003812342.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 3815487 - 3816980 bp Length : 1494 bp Strand : - Note : silverDB:HdN1F4175 DNA sequence : ATGTCATTGGCCAGGATGGCCGCGCCTGCTCCGACGCTCCCCTATGAGCGCCACCGGCCGGAAGAAACGCTGCTCTATCA ACTCATCGAAACCTCTTACCCCGCGTTTCGTGCCCAGCTCGAAGCCCAAGGACAAAATCTGCCCGCCTTCGTCCAGCAGG AATTTGACGATTTCCTCAAATGCGGTCGCCTCGACTACGGATTCCTGCGCGTGTGCTGCGAAGATTGCAAACACGAGCGC TTGGTTGCTTTCAGTTGCAAACGGCGGGGTTTCTGCCCAAGTTGCGGCGCTCGGCGGATGGCAGAATGCGCTACGTTGCT GGTGGATGAAGTGTTGCCCAAAGAGTCTATCCGGCAGTGGGTACTGAGTTTCCCCTATGAGCTGCGGTTTCTGCTGGCTC AGCAACCCGCCATGATGGGCAAGGTGCTGGAGATCGTCTATCGAACACTGGCCACTCACTTGGTCAAGAAAGCCGGGTTC AACAAGCGCACCGCCCATACGGGTGCTGTCACCCTGATCCAGCGCTTCGGTTCTGCACTGAATCTGAATATCCATTTCCA CATGCTGTTTCTTGACGGTGTGTACGCCGAGGACAAATACGGCGTCATGCGCTTTCACCGCGTCAAGGCACCCAACATAG AAGAACTCAACACGCTCGTGCATCAGATCAGTCATCGCGTCACCCGGTTTCTGGAGAAGAAGGGCTTACTGCAACGCGAT GATGAAAACACTTACTTGCAGATGGATTCCATCGCCCAAGAGGATGATGCCCTCAGCCAGTTGCAGGGGCATTCCATAAC ATACCGTATCGCAATGGGGCCGCAGAAAGGACGCAAGGTGCTCACTCTGCAAAGTCTTCCACCCAGATTGGACACGCCCA GAGAATCAGACCGGGTAGCCAAGCAAGCAGGCTTTTCCTTGCACGCTGGCGTGATGGCCGAACCCCACCAACGCGACGTG CTGGAAAGGCTGTGCCGCTACATTTCCCGGCCAGCGGTCTCGGAAAAGCGGCTGACGCTCACCGGCAACGGTAAAGTCCG CTATGAACTGAAGACGCCGTACCGGGATGGCACCAGCCATGTATTTTTCGATCCGCTGGATTTCATTGCGCGATTGGCGG CACTGGTGCCGAAACCGCGCGTAAACCTGACGCGGTTCCACGGTATTTTCGCCCCCAACAGTAAACATCGGGCGCTGATC ACGCCAGCAAAAAGAGGTAAGGGGAGGAAACCTGCGGAACAGGGATGCTTAGAAAAGACCATTGCCGAACGCCGCAAAGC CATGACCTGGACGCAACGATTGAAGCGCATTTTCAACATCGACATAGAAAAGTGCGAGCTTTGCGGCGGGCACGTCAAGG TGGTCTCTTGCATCGAAGACCCTGCCGTGATCGAAAAAATTCTGCAACATCTGGCGATGAAGGAATCGCTGCCGTTACCC CGCGTCCATGAAGCGAGGGCGCCGCCGGATCAGGCGGCGCTGTTCCAGCTCTAA Protein sequence : MSLARMAAPAPTLPYERHRPEETLLYQLIETSYPAFRAQLEAQGQNLPAFVQQEFDDFLKCGRLDYGFLRVCCEDCKHER LVAFSCKRRGFCPSCGARRMAECATLLVDEVLPKESIRQWVLSFPYELRFLLAQQPAMMGKVLEIVYRTLATHLVKKAGF NKRTAHTGAVTLIQRFGSALNLNIHFHMLFLDGVYAEDKYGVMRFHRVKAPNIEELNTLVHQISHRVTRFLEKKGLLQRD DENTYLQMDSIAQEDDALSQLQGHSITYRIAMGPQKGRKVLTLQSLPPRLDTPRESDRVAKQAGFSLHAGVMAEPHQRDV LERLCRYISRPAVSEKRLTLTGNGKVRYELKTPYRDGTSHVFFDPLDFIARLAALVPKPRVNLTRFHGIFAPNSKHRALI TPAKRGKGRKPAEQGCLEKTIAERRKAMTWTQRLKRIFNIDIEKCELCGGHVKVVSCIEDPAVIEKILQHLAMKESLPLP RVHEARAPPDQAALFQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| 1_194 | CAJ77051.1 | Transposase ORF513 | Not tested | AbaR1 | Protein | 9e-178 | 69 |
| tnpA | ACF06161.1 | transposase | Not tested | Tn5036-like | Protein | 9e-178 | 69 |
| Pmu_02840 | YP_005176185.1 | ISCR2 transposase | Not tested | ICEPmu1 | Protein | 1e-159 | 66 |
| rcr2 | AEQ20907.1 | mobilization protein | Not tested | Tn6166 | Protein | 1e-159 | 66 |
| tnpA of ISCR2 | AFH57204.1 | transposase | Not tested | AbaR4a | Protein | 2e-159 | 66 |
| rcr2 | AEZ06047.1 | Rcr2, mobilization protein | Not tested | Tn6167 | Protein | 1e-159 | 66 |
| ABK1_0256 | YP_005512828.1 | Putative transposase | Not tested | AbaR4d | Protein | 1e-159 | 66 |
| BJAB07104_00280 | YP_008207745.1 | hypothetical protein | Not tested | AbaR25 | Protein | 1e-159 | 66 |
| BJAB0868_00284 | YP_008211610.1 | hypothetical protein | Not tested | AbaR26 | Protein | 1e-159 | 66 |
| ABZJ_00263 | YP_005524219.1 | putative transposase | Not tested | AbaR22 | Protein | 1e-159 | 66 |
| ABTW07_0267 | YP_005797163.1 | putative transposase | Not tested | AbaR4e | Protein | 1e-159 | 66 |
| 1_710 | CAJ77040.1 | Transposase | Not tested | AbaR1 | Protein | 9e-131 | 54 |
| rcr3 | ACS32047.1 | Rcr3 | Not tested | SGI2 | Protein | 5e-131 | 53 |
| unnamed | AAK02053.1 | putative transposase-like protein | Not tested | SGI1 | Protein | 5e-131 | 53 |
| rcr3 | AGK06976.1 | Rcr3 | Not tested | SGI1 | Protein | 5e-131 | 53 |
| rcr3 | AGK07106.1 | Rcr3 | Not tested | SGI1 | Protein | 5e-131 | 53 |
| 1_732 | CAJ77036.1 | Transposase-like protein | Not tested | AbaR1 | Protein | 9e-131 | 53 |
