Gene Information

Name : glnA2 (HDN1F_30770)
Accession : YP_003812300.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 3779476 - 3780882 bp
Length : 1407 bp
Strand : -
Note : silverDB:HdN1F4124

DNA sequence :
ATGTCGTCCAAAACGCAGTCTCTGATCCAAGAAAGCAAAGCACGCTGGGTTGATTTACGCTTTACCGACACCCTCGGCAA
AGAGCAACACGTCACCTTCCCTGCTCACACCATGGGCGAATCCGCCTTTGAAGAAGGCAAAATGTTCGATGGTTCCTCCA
TCCACGGCTGGAAAGGCATCGAAGCCTCCGACATGGTGTTGATGCCTGACGATGCCAGCGCCGTGCTCGATCCGTTCACC
GATGAGCCCACCGTGATCGTGCGCTGCGACATTCTCGAACCCGCCACCATGCAGGGTTATAGCCGCGACCCACGCTCGGT
TGCACGCCGCGCAGAAGAATATCTGAAAACCACCGGCATTGCCGACACCGCCTACTTTGGCCCAGAACCCGAATTTTTTA
TCTTCGACTCAGTGCAGTGGAAAAATGAAATGCAGGGCGTAAGCTTCAGCATTCATTCTGACGAAGGCGCATGGGTCAGC
AACGATGAATTCAGCCGCAATAACACCGGCCATCGGCCGCGCGTAAAAGGCGGTTATTTCCCCGTACCGCCGGTAGATTC
GCTGCACGATGTGCGCGCTGCGATGTGCTCCGCGATGGAAAATATGGGCCTCAGCATCGAAGTTCATCACCACGAAGTGG
CCAACGCCGGCCAGTGCGAAATCGGCGTGCCTTTCAATACCTTGGTAAGAAAGGCTGACGAAGTACAGATTCTAAAATAC
TGCGTACATAACGTTGCCCATCAGTACGGCAAAACTGCGACTTTCATGCCCAAACCACTGGTAGGCGATAACGGTTCTGG
TATGCACGTTCACCAATCGCTGTTCAAGAACGGCAAAAACCTGTTCTCAGGCGACGGCTATTCAGGCCTTTCCGAAACCG
CACTGTACTACATTGGCGGCATTATCAAACACGCCAAAGCCTTGAACGCCCTCACCAACCCCGGCACCAACTCCTACAAG
CGCCTGGTGCCTGGCTTTGAAGCGCCCGTTATGCTGGCCTACTCCGCCAGCAACCGTTCTGCCTCGATCCGGATTCCATG
GGTAAAAAATCCGAAAGGCCGCCGCATCGAAGTGCGCTTTCCAGATCCCACCGCCAACCCCTACCTCACTTTTTCTGCAC
TGATGATGGCGGGTCTGGATGGCATCAAGAATCACATCCACCCCGGCGATGCCATGGACAAAAACCTCTATGACCTGCCG
CCAGAAGAGTCAAAACTGGTACCCCGAGTGGCGCACAGTCTGGATCAGGCGATTGATGCGCTTCTGGCAGACAAAGCATT
TCTGCTGGAAGGCGGCGTGTTCACCGAGGACATGCTCAGCGCTTATGTAGAGATGAAAATGGCGGAAGTAACGCGCATGC
GGCAGGCCGTTCACCCCGTTGAATTTGATATGTACTACAGCCTGTAA

Protein sequence :
MSSKTQSLIQESKARWVDLRFTDTLGKEQHVTFPAHTMGESAFEEGKMFDGSSIHGWKGIEASDMVLMPDDASAVLDPFT
DEPTVIVRCDILEPATMQGYSRDPRSVARRAEEYLKTTGIADTAYFGPEPEFFIFDSVQWKNEMQGVSFSIHSDEGAWVS
NDEFSRNNTGHRPRVKGGYFPVPPVDSLHDVRAAMCSAMENMGLSIEVHHHEVANAGQCEIGVPFNTLVRKADEVQILKY
CVHNVAHQYGKTATFMPKPLVGDNGSGMHVHQSLFKNGKNLFSGDGYSGLSETALYYIGGIIKHAKALNALTNPGTNSYK
RLVPGFEAPVMLAYSASNRSASIRIPWVKNPKGRRIEVRFPDPTANPYLTFSALMMAGLDGIKNHIHPGDAMDKNLYDLP
PEESKLVPRVAHSLDQAIDALLADKAFLLEGGVFTEDMLSAYVEMKMAEVTRMRQAVHPVEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-102 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA2 YP_003812300.1 glutamine synthetase VFG1399 Protein 6e-103 50