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Name : HDN1F_29810 (HDN1F_29810) Accession : YP_003812207.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Unknown Product : transposase, IS66 family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 3669462 - 3671042 bp Length : 1581 bp Strand : - Note : silverDB:HdN1F4000 DNA sequence : ATGAAAACCACTGAAAACACCACACTTCCAGACGATGTTGAACGCCTAAAGGCGTTGGTTTTGGCGTTGCAGAATAAAAA TTCCGCCTTGCAAAAAGAAGCCGCAAAGGAAGCTGCAGAAGCGAAACGCTTCGAAAAACTGTACTACGAAACATGGGAGA AGTGGCAGCTGGCTTTAAGAAGCCGCTTTGCTTCCAAAAGCGAAGCGTACGATGGGCAGGTGGATCTCTTTAACGAGATT GAGCAAACGCTGGAGCCCACCGTCGAAGAAATTGCGGAAGCCGACGCAGAAAAGGAAACCATCACCTACACCCGTAAAAA AGCTCGTGCACCGCGCATTGCCCCTGAGCTTCCCCGCGAAGATGTGCTGCACGATCTGGCCGATAAAGACAAAGTTTGCG GCTGCTGTGGCCATGATCTGCACCGCATGGGCGAAGAAGTCAGCGAAAAGCTCGAATTTATTCCCGCACACGTGAAAGTG CTACGTCACATCCGTCCCAAATACAGCTGCCGGCAGTGTGAACAGCAAGCCATTCGTACGGAGATCAAAATCGCGCCAGT ACCAGCCAGCGTTTTACCCAAAAGCATCGCGTCTGCCAGTCTGCTTACACAAATCATTTGCGCCAAGTTTGTTTATGGTT TGCCGCTTTATCGCCAGGAAGCCCTGTTTAAGAGCTTTGGGATTGAAATTAACCGTCAAACCATGAGTCGATGGCTCATT AAAGTAAGCGAACAGCTCCGACCGCTTTACAAATACTTTCACCGAAGGCTGCTTGAACAGCCGGCGATCTGGTCGGACGA TACCCGCATAAAAGTCATTGAGACCGACAATGCTCAATGCGCCATGTGGGTGTACGGATGTGGAATGGAAACGCCTTTGC CTGGTGGCGCGCCACCGATTGTGCTGTACGATTATCGAGACGGCCGAGCGGGCCGCTATATCACCGACTTTTTGCAGGGC TACAGCGGCCTTCTGCAAGTCGATGGCTATCAAGCGTACCAGCAAACCCACGCCACGTTAATTGGCTGCTGGGCACACGC GCGACGTAAATTCAAAGAAGCCAAAGACGTGCAACCCAAAGGCAAAACAGGGCGTGCAGATGTGGCGCTCAGCTTGATCC AAAAGCTCTATGCAATTGAGAAATCACTCCCAGAAAAAACCATCGAAGAACGCCTCGCAATTCGCCAGCAACAATCCGCA CCGATCCTCCAGCAAATCAAAGAGTATCTGGAGAAAACCGCTTTCGAGGTGCCGCCCAAAACCGCCATCGGCCTTGCCGT GCACTACAGCTTAAACCAATGGAACAAACTCACCGCCTACTTGGGCTACGGCGAGACCAGTATCGACAACAACCGCGCGG AGCGCGCCATCAAACCCTTTGTGATCGGCCGCAAAAACTGGCTGTTCGCCAACACCCGCACCGGTGCCACTGCAAGCGCC ATACTCTACAGTATCGTAGAAACCGCGAAAGCCAACGGCCTGAGACCTGAGCAATATCTACAAGCCTTGCTCGAACAACT GCCCACCACCCAAGCAGAAGAGATCGAACTGCTGACGCCGTGGAATATTACGTTGAGTTAG Protein sequence : MKTTENTTLPDDVERLKALVLALQNKNSALQKEAAKEAAEAKRFEKLYYETWEKWQLALRSRFASKSEAYDGQVDLFNEI EQTLEPTVEEIAEADAEKETITYTRKKARAPRIAPELPREDVLHDLADKDKVCGCCGHDLHRMGEEVSEKLEFIPAHVKV LRHIRPKYSCRQCEQQAIRTEIKIAPVPASVLPKSIASASLLTQIICAKFVYGLPLYRQEALFKSFGIEINRQTMSRWLI KVSEQLRPLYKYFHRRLLEQPAIWSDDTRIKVIETDNAQCAMWVYGCGMETPLPGGAPPIVLYDYRDGRAGRYITDFLQG YSGLLQVDGYQAYQQTHATLIGCWAHARRKFKEAKDVQPKGKTGRADVALSLIQKLYAIEKSLPEKTIEERLAIRQQQSA PILQQIKEYLEKTAFEVPPKTAIGLAVHYSLNQWNKLTAYLGYGETSIDNNRAERAIKPFVIGRKNWLFANTRTGATASA ILYSIVETAKANGLRPEQYLQALLEQLPTTQAEEIELLTPWNITLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71494.1 | unknown | Not tested | Hrp PAI | Protein | 4e-78 | 41 |
