Gene Information

Name : fepC (HDN1F_26390)
Accession : YP_003811865.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3245665 - 3246426 bp
Length : 762 bp
Strand : -
Note : silverDB:HdN1F3531

DNA sequence : 
GTGATTTTGCAGGCCGAGAATGTCAGCTGGTTTATCCATGAACACCCAGTCGTCGATTGCGCCTCTCTGTATGTGCTTGA
AGGAGAGTGCGTAGGCTTGATTGGCCCAAACGGTTGCGGAAAATCCAGCCTGCTGCGCATGCTCTACCGTGCAGTACCAC
CGGATACCGGTGAGGTTCAGCTGCATGGTCGCAATATCTGGAAGATCAAATCGCGCAGTTTTGCACAACAAACTGCGGTG
TTGGCGCAAGAGATGACGCTACCCTTTGATTGTAGCGTACGCGAAGCGGTCAGCATGGGCCGATTCCCTCACCAGACGAC
GTGGTTGCGCGATAGTAGCGACGACCACGCCCACGTGCGTACAAGCCTAGAACAAGTGGGCGCGTGGGAGCTGGTCGATC
GCCGTCTGGCGACGCTTTCCGGCGGCGAGCGCCAGCGTGTTTGGCTGGCGCGAGCGCTGGCACAACAGCCACAATTGCTG
TTTCTGGATGAACCCACCAACCATCTGGATATCCGCCACCAACTGAACTTGATGGCGCGTGTGCGTGAACTTAGCAAAAC
CACATTGGTGGTATTGCACGATCTCAACCTAGCGGCACAATTTTGCACTCGCCTGTACTTGATGAACAAGGGCCGACTGG
TTACAGAGGGAGCACCCGAGCATGTTTTGACGCCGGAAAATCTCCGCTCCGTGTACGGCGTGAACGCTTTAGTGGACCAA
CATCCTATCACGCAGAGAGTGAGGGTTTCTTACTGGCACTAG

Protein sequence : 
MILQAENVSWFIHEHPVVDCASLYVLEGECVGLIGPNGCGKSSLLRMLYRAVPPDTGEVQLHGRNIWKIKSRSFAQQTAV
LAQEMTLPFDCSVREAVSMGRFPHQTTWLRDSSDDHAHVRTSLEQVGAWELVDRRLATLSGGERQRVWLARALAQQPQLL
FLDEPTNHLDIRHQLNLMARVRELSKTTLVVLHDLNLAAQFCTRLYLMNKGRLVTEGAPEHVLTPENLRSVYGVNALVDQ
HPITQRVRVSYWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-34 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-32 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_003811865.1 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component BAC0164 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_003811865.1 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component VFG1042 Protein 2e-33 41