Gene Information

Name : HDN1F_25770 (HDN1F_25770)
Accession : YP_003811803.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : transposase IS200-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 3171748 - 3172164 bp
Length : 417 bp
Strand : -
Note : silverDB:HdN1F3446

DNA sequence :
ATGAGAGAAAACAACGACATTAGACACGGTAGAAACTGTGTTTTCAAAATACACGTGCATTTGGTCTTCGTGACGAAGTA
CCGGCGTGGCGTGTTCACAAAAGAAATATTGGCCGACTTGCGCGAAACATTCTCAGGTGTTTGCACGGACTTTGAGGCAG
AGCTGGTGGAATTCGATGGCGAGGACGATCACGTCCACCTGTTGGTGAACTACCCGCCGAAAGTGTCTGTCTCAAAGCTG
GTGAATAGCCTCAAGGGTGTATCGAGCCGGGTCATTCGCAAGAAGAATTACCCAAGCATCAGGAAAAAACTATGGGACGG
CGCATTATGGTCACCCAGTTATTTTGCGGGGAGCTGTGGCGGTGCGCCCATTGATGTTATACGCCAATATATCGAACAAC
AAAGGACGCCAGAATAG

Protein sequence :
MRENNDIRHGRNCVFKIHVHLVFVTKYRRGVFTKEILADLRETFSGVCTDFEAELVEFDGEDDHVHLLVNYPPKVSVSKL
VNSLKGVSSRVIRKKNYPSIRKKLWDGALWSPSYFAGSCGGAPIDVIRQYIEQQRTPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 9e-46 66
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 2e-44 65