Gene Information

Name : HDN1F_25670 (HDN1F_25670)
Accession : YP_003811793.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 3161075 - 3162100 bp
Length : 1026 bp
Strand : -
Note : silverDB:HdN1F3431

DNA sequence :
GTGCCCGTGTATAACGAACGGGAAGTGCTGCCGTTATTCTTGCAGCGGCTAAAAGCGACGCTGAAAACCCTCGACCAGAA
AGCTGAAATTCTGTTTGTAGACGATGGAAGTCGCGATGGAAGCGCAGACTATTTGATCAAGTGCGCCCAAACGGACACTA
CACTACGCATCGTACGACTGAGCCGCAACTTCGGCAAAGAAGCGGCGCTCTCTGCCGGTCTGCACCTTGCCCAAGGAAAC
GCCGTCATCATCATTGATGCCGATTTGCAGGATCCGCCCGAAGAAATTCCCCGCATGTTAAGGGCCCACCATGATGGCGC
TGACGTCGTCTGCATGCGTAGAAGTAGCCGCCCCGGTGAGACACACTTCAAAAAACTCAGCGCGCACTGGTTTTACCGCA
TCCTCAACCGCATCAGCCGGTTTGAAATTCCAGAAGACACCGGCGATTTCCGTCTGATGAGCCGCCGCGCGCTGGACGCA
CTGAATCAACTACCTGAACGTCAGCGTTATATGAAGGGCCTATTTGCTTGGGTTGGATTTCCCACCACCATATTGCACTA
CGCACGCGAAGTGCGCGCCGCAGGCAACACAAAATGGAACTATCCTGCGCTTTTTGGCTTGGCCTTTGAAGGTATCACAT
CCTTTTCCATCACCCCGCTGCGCTATGCAACGGCCATAGGCGCCCTCGCAGCGGTGACCGGACTGTTCTTTGGCCTAGGC
ATCGTCATTAAAACCCTGATCTGGAGCGACCCAGTGCAAGGGTATCCGTCTTTAATGGCCATGCTCACGTTTCTAGGTGG
CGTTCAGCTACTAGGCATCGGCTTGCTAGGCGAGTACGTGGGAAAAACCTACTTCGAAGCCAAACAACGTCCCTTGTACC
TGATACGTGACGTTGTAGGCGCACCTAATCACCTCCAGCACAGACAAGCACATACACTGCCGCAAGTTTCCGAAAAAATA
GTGCCAACCATGGCAGCCACAGAATCCTTCCCAGAAAACAAAGCCCGTGCCGCCGTCATTCAATAG

Protein sequence :
MPVYNEREVLPLFLQRLKATLKTLDQKAEILFVDDGSRDGSADYLIKCAQTDTTLRIVRLSRNFGKEAALSAGLHLAQGN
AVIIIDADLQDPPEEIPRMLRAHHDGADVVCMRRSSRPGETHFKKLSAHWFYRILNRISRFEIPEDTGDFRLMSRRALDA
LNQLPERQRYMKGLFAWVGFPTTILHYAREVRAAGNTKWNYPALFGLAFEGITSFSITPLRYATAIGALAAVTGLFFGLG
IVIKTLIWSDPVQGYPSLMAMLTFLGGVQLLGIGLLGEYVGKTYFEAKQRPLYLIRDVVGAPNHLQHRQAHTLPQVSEKI
VPTMAATESFPENKARAAVIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-48 46
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HDN1F_25670 YP_003811793.1 family 2 glycosyl transferase VFG0670 Protein 3e-51 46