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Name : ribD (HDN1F_25400) Accession : YP_003811766.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 3133230 - 3134399 bp Length : 1170 bp Strand : + Note : silverDB:HdN1F3390 DNA sequence : ATGCCTTCCTACGATTTCAACGCCTTTGATCATCAAATGATGAGCCGCGCGCTGCAGCTGGCGCCGCGTGGCCTGTACAC CACTCACCCCAACCCCAGAGTCGGCTGCGTGATCGTGCAGAACGGCGCGATTGTCGGCGAAGGCTGGCACCAATTAGCGG GCCAAGGCCACGCAGAGGTGTTGGCCTTGGAACAGGCCGGTGAACGCGCCAAAGGTGCAACGGCTTACGTTACCTTGGAA CCTTGCGCGCACTACGGGCGCACGCCCCCCTGCGCCAACGCACTGATCAAGGCCGGAATTGCCCGTGTTGTAGGCGCAAT GTCCGACCCTAATCCGCGTGTTTCCGGCGGCGGATATGGCCTATTGCGAGCGGCAGGAATCAAAACCGATAACGGCCTAC TCAAACAGCAAGCGGAAGCCTTGAATCCGGGCTTTATCAAGCGGATGCGCGGTGGCTTGCCTTGGGTGCGCGTCAAATCC GGCATCAGCCAAGATGCGCGTACCGCGATGGCCTGCGGCGAGAGCCAGTGGATTACTTCTAGCCCCGCCCGCGCCGACGT GCAACGCCTGCGCGCGCGCAGCGAGGCCGTAATTACTGGCGTAGATACCGTATTGTCTGACGACCCTGCACTTACCGTGC GCCCCGCCAGTTGGCCGGCAGATGATGCGCCGTGGGGATGGCCTGACGGGTTCACGCCCATCCAGCCACTGCGAGTGATT CTGGATAGCCAATTGCGAACCCCCACCAGTGCCCGCCTGCTGCGGGAGCCTGGCCAGAACGTTTTTGCCCACATTGGCTC CAATCCCGAACGCGAAGAAGCCCTGCGTGCTTGTGGTGCCACCTGCATCAGCTTTCCGGGGCGGGATGGGCGTGTAGATC TCGTGCCGGTATTGCAGTGGCTCGCCGCGCAAGAAGTCAACGAAGTGTTGATTGAAGCAGGGGCGAGTGTTGCCGGTTCT TTTATTGAAGCCGGTTTGGTGGATGAGTGGGTGGTCTATCAAGCCCCTTGTCTGCTTGGCAGCGAAGCACGTCCGGCGCT GATTTTAGAGGGTTTATCGGGCATGAAAGATAAGCGCACGCTGGATCTGGTCGATTCTCGGCAGATTGGTTTAGATCATC GCTTTACTTACCGCCTGCGCTCCTTGCCCACACTCGCAAAATCACTATAG Protein sequence : MPSYDFNAFDHQMMSRALQLAPRGLYTTHPNPRVGCVIVQNGAIVGEGWHQLAGQGHAEVLALEQAGERAKGATAYVTLE PCAHYGRTPPCANALIKAGIARVVGAMSDPNPRVSGGGYGLLRAAGIKTDNGLLKQQAEALNPGFIKRMRGGLPWVRVKS GISQDARTAMACGESQWITSSPARADVQRLRARSEAVITGVDTVLSDDPALTVRPASWPADDAPWGWPDGFTPIQPLRVI LDSQLRTPTSARLLREPGQNVFAHIGSNPEREEALRACGATCISFPGRDGRVDLVPVLQWLAAQEVNEVLIEAGASVAGS FIEAGLVDEWVVYQAPCLLGSEARPALILEGLSGMKDKRTLDLVDSRQIGLDHRFTYRLRSLPTLAKSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 6e-59 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 6e-59 | 48 |
