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Name : lysS (HDN1F_22510) Accession : YP_003811478.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2784855 - 2786357 bp Length : 1503 bp Strand : + Note : silverDB:HdN1F2995 DNA sequence : ATGGCAAATAACGAACAGAACACAGGGCATGTTGAACAGGATGAGAATAAGCTCATTGCAGAGCGGCGTAGCAAGTTAGG ACGAATTCGTAGTCAGCGCAACGCTTATCCAAATGATTTTCGCCGCGAGCATTACTGCCAAGGTCTGCAGGATGCCCATC GTGATCAGACGCGTGAAGATTTGGAGAAGGCGCTGATTTCGGCGAGCGTGGCTGGGCGCGTGATGCGCAATCGCGGGGCG TTCCTAGTAATTCAAGACATGACCGGAAAGATTCAGCTCTATGTAAACCGCCAAGTGCTTGCACCGGAAGTATTGGATGA TATCAAGAGCTGGGATTTGGGTGATATTGTTGGCGTAAAAGGGATCTTGCATCGTTCCAACAAGGGCGAGCTTTATGTGG ATATGGCGGAAGCGCACCTGTTGGTAAAGAGCTTGCGCCCGCTGCCAGATAAATTTAAGGGCCTTTCTGACCAAGAGATG CGTTATCGCCAGCGTTATGTTGACCTGATTGTGAATGAGGAAGTTCGCAATACTTTTCGCGTGCGCAGCCAGACCGTAGA TTATATTCGCAACTATCTGAAGCAGCGCGATTTTCTAGAAGTAGAAACGCCGATGATGCAGGTGATTCCGGGTGGAGCGA CGGCGCGCCCGTTCGTGACGTTTCACAATGCGTTGGATATTGACCTGTATTTACGCATTGCGCCTGAATTGTTCCTCAAA CGTTTGGTGGTGGGTGGATTTGAGCGGGTGTTTGAGATTAACCGTAACTTCCGTAATGAGGGGCTTTCAACGCGCCACAA TCCGGAGTTCACCATGCTGGAGTTTTATCAAGCGTATGCAGATTATCGTGATCTGATGGATCTTACGGAGGAGATGTTGC GCGGCTTGGCTGAAACGGTTTTGGGCAGTACGCAGGTGCATTATCAGGGAGATGTTTACGATTTCGGCAAACCTTTCCGC CGCATGACGGTGGTTGAGGCAATCCTGCATTTCAATCCTGATCTTCGTGCAGAGCAGTTGGCAACGCGGGAGGCTGCATG CGAAGTTGCTGCGCGTTTAGAGATTGCCATCAAGGATAGCTATGGCCTAGGTAAAATTCAGATTGAAATTTTTGAGGCCA CTGCGGAACATCAGCTCAAAGACCCAACGTTTATTACCGCGTACCCTACGGAGGTTTCGCCGCTTGCGCGTCGTAACGAT CACGATCCGTTTGTGACCGACCGTTTCGAGTTTTTTGTGGGTGGTCGTGAGATTGCGAACGGTTTTTCAGAGTTGAACGA TTCGGAAGATCAGGCGGAGCGCTTCCAGAAGCAAGTGGAGAGCAAGGATGCAGGTGACGATGAGGCTATGCATTTTGACC AAGATTACATTACCGCACTGGAGTACGGCTTGCCGCCAACGGCCGGAGAGGGAATTGGAATCGACCGATTGGTCATGCTG CTGACAGACTCGCCGTCGATTCGCGATGTGATCCTCTTTCCGCACATGAGGCCGCAAAGTTAG Protein sequence : MANNEQNTGHVEQDENKLIAERRSKLGRIRSQRNAYPNDFRREHYCQGLQDAHRDQTREDLEKALISASVAGRVMRNRGA FLVIQDMTGKIQLYVNRQVLAPEVLDDIKSWDLGDIVGVKGILHRSNKGELYVDMAEAHLLVKSLRPLPDKFKGLSDQEM RYRQRYVDLIVNEEVRNTFRVRSQTVDYIRNYLKQRDFLEVETPMMQVIPGGATARPFVTFHNALDIDLYLRIAPELFLK RLVVGGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYRDLMDLTEEMLRGLAETVLGSTQVHYQGDVYDFGKPFR RMTVVEAILHFNPDLRAEQLATREAACEVAARLEIAIKDSYGLGKIQIEIFEATAEHQLKDPTFITAYPTEVSPLARRND HDPFVTDRFEFFVGGREIANGFSELNDSEDQAERFQKQVESKDAGDDEAMHFDQDYITALEYGLPPTAGEGIGIDRLVML LTDSPSIRDVILFPHMRPQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-136 | 57 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-81 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003811478.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 6e-137 | 57 |
