Gene Information

Name : HDN1F_21010 (HDN1F_21010)
Accession : YP_003811329.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 2614065 - 2616185 bp
Length : 2121 bp
Strand : +
Note : silverDB:HdN1F2783

DNA sequence :
ATGAACAACGATACCACCATTAAACAAAGTGCCATTCCATCGGTCTCTATGACTTACGCCCAAAGCGGCGCGTCCACCAC
GGCCAATGAGTTGGGGATGCGCGCCATGCAAGAGCGCGCTTACGAGCACCGAGGTGAGCAATATTTATTGATTAAATCGC
CGCCTGCTTCTGGCAAAAGCCGCGCCTTGATGTTTATCGCGCTGGATAAGCTGCATAACCAAGGCGTAAAAAAGGCCATT
ATTTTGGTGCCCGAAAAATCCATCGGCGCCAGCTTTAACGACGAGCCACTCACAAAATACGGCTTTTATTGGGATTGGCA
GGTGCTACCACGCTGGAACCTGTGCAACGCCCCTGGCACCGATAATAGCGGCGGTAAGGTAAAAGCGCTGGGCGAGTTTT
TACAGTCTGATGCGCGTGCTTTGGTGTGCACCCATGCGACTTTTCGTTTTGCCTTTGATGAGCTGGGCGTGGAGGCTTTT
GATAATTGCCTGATAGCGGTGGATGAGTTTCACCATGTTTCGGCCAACCCAGATAATAAACTCGGCGCACAGCTGGGGGC
GCTGATTGCACGCGATAAAAGCCATATCGTAGCGATGACGGGCAGCTATTTTAGGGGCGACGCCGAGGCAGTATTAGCGC
CTACCGACGAAGCGCGTTTTCATACCGTGACTTACACCTATTACGAGCAACTTAGCGGCTACGAGCATTTAAAACAGCTG
GATATTGGCTATTTCTTTTACAGCGGGCTGTACGGCGATGATTTGCTCAAGGTGCTTAATCCCACAGAAAAAACCATTAT
TCATATCCCCAATGTGAACTCGCGCGAGAGCAGCAAAGATAAAATCCGCGAGGTCGAGCACATTATCGAGTCGCTGGGCG
CTTGGCAGGGCACAGACCCAGTTACGGGCTTTCAGCTGGTGCAAACACCGAGCGGCAAGCTGCTTAAAATCGCAGACTTG
GTGGACGACGACCCCGCCAAGCGCGACCGCGTTGCCGCAGCTCTCAAAGACAGCGCGCACAAGCACAACCGCGAGCATGT
GGATATCATCATTGCGTTGGGCATGGCCAAAGAAGGCTTTGACTGGATTTGGTGCGAGCACGCCCTGACCGTAGGCTATC
GCGCCAGCCTCACCGAAATTGTGCAGATTATTGGCCGCGCCACGCGCGACGCTAAGGGTAAAACCCGCGCGCGCTTTACC
AATTTAATCGCCGAGCCAGACGCCAGCGAAAGCGCGGTGACCGAGGCCATTAACGACACATTAAAGGCCATTGCCGCCAG
CCTTTTAATGGAGCAGGTATTAGCGCCGCGTTTTGAATTTACCCCCAAAACCGAAACCAGCGGCCCACAGCAGGGCTTTG
ACTATGGCGATGCTGGCTATCAACCCGGCAAAAACAACGTCGGCATCAACGAGCAAACCGGCCAGTATCATATTGAGATC
AAAGGCCTAAGCACGCCACAAACACCTGCGGCGGCGCGCATTTGCAGCGAAGATTTAAATGAGGTAATCGCTGCCTTTGT
GCAGGACAAACGCAGCATCGAGCGCGGTATGTTTGACGAAGACTTAGTGCCTGAGGAGCTCACCCAAGTGCGCATGGGCA
AAATTATCCAAGAACGATACCCGGAGCTGGATAGCAATGATCAAGAAGCGGTGCGCCAGCACGCGGTGGCGGCGCTTAAT
ATCATTCAGCAAGCCAAAGGCCAGCTTGGCTTATTGGATGTGGGCTTGGATGTGGGCGTGGGCGCGAGCACAGCAGGCCA
AAGCGCAGGCAATGAGCCAGGGCTGAACACCGCCTTGCTGCAAGGCGTGCGCAAGTTTGCTATGGATGTGCGCGAGCTGG
ATATTGACCTGATTGACCGCATCAACCCCTTTAGCGAGGCCTACGCGATTTTGGCCAAAACCATGAGCGAGGACAGCCTA
AAGCAGGTGGCGGAGATCATTACGGCTAAGCGCACCGCGCTTGCTCCAGATGAAGCCAAAGAGCTGGCCCTGCGCGCTAT
GCAGTTTAAAAAAGAGCGCAATCGCCTGCCTAGCGCTACGGCATCCGACCCTTGGGAGCGACGCATGGCAGAGGGCGCGG
CGGCCTTTATGCGTTTTAAAAAGGAAGGGCGCTATGAGTGA

Protein sequence :
MNNDTTIKQSAIPSVSMTYAQSGASTTANELGMRAMQERAYEHRGEQYLLIKSPPASGKSRALMFIALDKLHNQGVKKAI
ILVPEKSIGASFNDEPLTKYGFYWDWQVLPRWNLCNAPGTDNSGGKVKALGEFLQSDARALVCTHATFRFAFDELGVEAF
DNCLIAVDEFHHVSANPDNKLGAQLGALIARDKSHIVAMTGSYFRGDAEAVLAPTDEARFHTVTYTYYEQLSGYEHLKQL
DIGYFFYSGLYGDDLLKVLNPTEKTIIHIPNVNSRESSKDKIREVEHIIESLGAWQGTDPVTGFQLVQTPSGKLLKIADL
VDDDPAKRDRVAAALKDSAHKHNREHVDIIIALGMAKEGFDWIWCEHALTVGYRASLTEIVQIIGRATRDAKGKTRARFT
NLIAEPDASESAVTEAINDTLKAIAASLLMEQVLAPRFEFTPKTETSGPQQGFDYGDAGYQPGKNNVGINEQTGQYHIEI
KGLSTPQTPAAARICSEDLNEVIAAFVQDKRSIERGMFDEDLVPEELTQVRMGKIIQERYPELDSNDQEAVRQHAVAALN
IIQQAKGQLGLLDVGLDVGVGASTAGQSAGNEPGLNTALLQGVRKFAMDVRELDIDLIDRINPFSEAYAILAKTMSEDSL
KQVAEIITAKRTALAPDEAKELALRAMQFKKERNRLPSATASDPWERRMAEGAAAFMRFKKEGRYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0715_00996 YP_008216144.1 hypothetical protein Not tested AbaR27 Protein 5e-82 42
CDPW8_0255 YP_005141822.1 putative ATP-dependent helicase Not tested Not named Protein 3e-93 42