Name : recG (HDN1F_19640) Accession : YP_003811192.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Resistance Product : RecG-like helicases Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2443865 - 2445961 bp Length : 2097 bp Strand : - Note : silverDB:HdN1F2588 DNA sequence : GTGACCCTAGCCGTACACGCTGACTCCGCGCTGCGAAGCCCCGTTCAATACCTGAAAGGCGTAGGGCCGACACTCGCCGT TCTACTGACACGACTGCACATTCATACTGTGCAGGATTTGCTATTTCATCTGCCTTTTCGCTACCAAGACCGTACTCAGC TAACCCCCATCGCAACGCTGGAAGGCAGCCAAGAAGCACTCATTCAGGGGGAAGTCCTTAGCTGCGATATTCACATGGGG CGGCGCCGCACCCTCGCCGTTCGAATCACCGACGGTAGCGGCACACTGCTGATCCGAATGTTTCACTTCTCAGCGACACA GCAAAAGCAGTTTGCAAAGGGACAATGGCTGCGCTGCTATGGCGAGGCGCGCGTCACCGCAAGCGGCCGAGAAATGGTGC ACCCAGAATATCGCCTGATCGACGATCCCGAGCAACCGCTTACCGAATCCCTGACCCCGATCTACCCGCTCACCGAAGGC ATCAGCCAAGCGCGCCTGCTAAAACTCACCGAAGAAGCACTTACGCGCTTAGACGCCCACCGCGAAGCCCTCGAACTCGT ACCGGAAGCGCTATTTCAAGCACGCAAGCTACCCAGCCTTGCCGACGCCCTGCACTATGTTCACCGGCCACCGACCGACG CCAATGTATACCAACTGTTGAACGGTAGTCACCCCGCCCAGCAGCGCCTCGCCCTTGAAGAAATGCTCGCCCATCATCTC AGCTTGCGGAAGCTGCGCGCCACGATTCGCCACCATCCAGCACCACCAATGCCCGCATCGCGTGAGCTAATCAGAGGGTT ATTACAACGCCTTCCCTTTGCACCCACAGGCGCACAAAATCGCGTATTTGCAGAGATCGAAGCCGATCTACAGCAACCTG CTCCAATGTTGCGGCTTGTGCAGGGCGACGTTGGTTCCGGCAAAACCCTCGTTGCCGCACTTGCCGCACTACAGGCCATT GAAGCCGGTTATCAGGTCGCACTGATGGCTCCCACCGAGATTTTGGCCGAGCAGCACTACCAGAATTTTTGTGAATGGTT TGAACCACTCGGCCTGCACACCCATTGGCTCACAGGCAAACTCAGTGCGCGCCAAAAGCGCCTCGTGCTGGAAGACACCC GTACTGGGCACACACACCTACTCGCCGGCACCCACGCGCTCTTTCAAGACGACGTGCATTATGCGCGTCTAGGCTTGGTC ATCATCGACGAGCAACACCGCTTTGGCGTCCACCAACGCCTTGCCCTCAAGCAAAAAGGCGCAGTGAACGGCATCCTGCC GCATCAACTCATCATGACCGCCACCCCCATCCCGCGCACATTGGCGATGAGCGCCTATGCCGATCTGGACACTTCCATCA TCGACGAACTCCCGCCCGGCCGAACCCCCATCACCACCGTAGCAGTAGACGCCAGTCGCCGCGACGAAATCATCCAGCGG GTCTACCAAAACTGCAAAACCGGCCGCCAAGCCTACTGGGTCTGCACCCTGATCGAAGAATCCGAAACCCTGCAATGCCA AGCTGCGGAAGATACCACCGAATACCTGCGCGCCGCCCTCCCCGACCTCCAAATCGGCCTGATACACGGGCGCATGAAAG CGCGAGAAAAATCACAAGTCATGGAAGCCTTCCAGCAGAACGCGATACAATTGCTGGTTGCAACCACCGTAATTGAAGTC GGCGTGAACGTGCCCAACGCATCCCTTATGATCATTGAAAATCCGGAACGCCTAGGGCTTGCCCAGCTACATCAGCTGCG CGGGCGCGTAGGTCGTGGCGCCGCGCAGAGCTTCTGCGTACTGCTCTATCAAAAACCCCTCTCACGCGCGGGCCGCGAAC GTATTGAAATTATGCGCGAAAGCCACGATGGTTTTGTTATCGCCCAGCGCGATCTAGAGCTGCGTGGCCCCGGAGAAGTG CTCGGCACCCGCCAAACGGGGGATCTGAACTTCAAAGTGGCCGACTTGCTGCGCGATCAAGACTTGCTGGACGATTGCAA GGCGCTGGCCGACCATGTTTTGTCTCACCACCCTGACTGCGTGGATACAATCATCCAGCGCTGGCTTGCGCAAGGACTGG AGTACGGGAGCGTTTAG Protein sequence : MTLAVHADSALRSPVQYLKGVGPTLAVLLTRLHIHTVQDLLFHLPFRYQDRTQLTPIATLEGSQEALIQGEVLSCDIHMG RRRTLAVRITDGSGTLLIRMFHFSATQQKQFAKGQWLRCYGEARVTASGREMVHPEYRLIDDPEQPLTESLTPIYPLTEG ISQARLLKLTEEALTRLDAHREALELVPEALFQARKLPSLADALHYVHRPPTDANVYQLLNGSHPAQQRLALEEMLAHHL SLRKLRATIRHHPAPPMPASRELIRGLLQRLPFAPTGAQNRVFAEIEADLQQPAPMLRLVQGDVGSGKTLVAALAALQAI EAGYQVALMAPTEILAEQHYQNFCEWFEPLGLHTHWLTGKLSARQKRLVLEDTRTGHTHLLAGTHALFQDDVHYARLGLV IIDEQHRFGVHQRLALKQKGAVNGILPHQLIMTATPIPRTLAMSAYADLDTSIIDELPPGRTPITTVAVDASRRDEIIQR VYQNCKTGRQAYWVCTLIEESETLQCQAAEDTTEYLRAALPDLQIGLIHGRMKAREKSQVMEAFQQNAIQLLVATTVIEV GVNVPNASLMIIENPERLGLAQLHQLRGRVGRGAAQSFCVLLYQKPLSRAGRERIEIMRESHDGFVIAQRDLELRGPGEV LGTRQTGDLNFKVADLLRDQDLLDDCKALADHVLSHHPDCVDTIIQRWLAQGLEYGSV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-102 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
recG | YP_003811192.1 | RecG-like helicases | BAC0356 | Protein | 0.0 | 62 |