Gene Information

Name : recG (HDN1F_19640)
Accession : YP_003811192.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Resistance
Product : RecG-like helicases
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2443865 - 2445961 bp
Length : 2097 bp
Strand : -
Note : silverDB:HdN1F2588

DNA sequence :
GTGACCCTAGCCGTACACGCTGACTCCGCGCTGCGAAGCCCCGTTCAATACCTGAAAGGCGTAGGGCCGACACTCGCCGT
TCTACTGACACGACTGCACATTCATACTGTGCAGGATTTGCTATTTCATCTGCCTTTTCGCTACCAAGACCGTACTCAGC
TAACCCCCATCGCAACGCTGGAAGGCAGCCAAGAAGCACTCATTCAGGGGGAAGTCCTTAGCTGCGATATTCACATGGGG
CGGCGCCGCACCCTCGCCGTTCGAATCACCGACGGTAGCGGCACACTGCTGATCCGAATGTTTCACTTCTCAGCGACACA
GCAAAAGCAGTTTGCAAAGGGACAATGGCTGCGCTGCTATGGCGAGGCGCGCGTCACCGCAAGCGGCCGAGAAATGGTGC
ACCCAGAATATCGCCTGATCGACGATCCCGAGCAACCGCTTACCGAATCCCTGACCCCGATCTACCCGCTCACCGAAGGC
ATCAGCCAAGCGCGCCTGCTAAAACTCACCGAAGAAGCACTTACGCGCTTAGACGCCCACCGCGAAGCCCTCGAACTCGT
ACCGGAAGCGCTATTTCAAGCACGCAAGCTACCCAGCCTTGCCGACGCCCTGCACTATGTTCACCGGCCACCGACCGACG
CCAATGTATACCAACTGTTGAACGGTAGTCACCCCGCCCAGCAGCGCCTCGCCCTTGAAGAAATGCTCGCCCATCATCTC
AGCTTGCGGAAGCTGCGCGCCACGATTCGCCACCATCCAGCACCACCAATGCCCGCATCGCGTGAGCTAATCAGAGGGTT
ATTACAACGCCTTCCCTTTGCACCCACAGGCGCACAAAATCGCGTATTTGCAGAGATCGAAGCCGATCTACAGCAACCTG
CTCCAATGTTGCGGCTTGTGCAGGGCGACGTTGGTTCCGGCAAAACCCTCGTTGCCGCACTTGCCGCACTACAGGCCATT
GAAGCCGGTTATCAGGTCGCACTGATGGCTCCCACCGAGATTTTGGCCGAGCAGCACTACCAGAATTTTTGTGAATGGTT
TGAACCACTCGGCCTGCACACCCATTGGCTCACAGGCAAACTCAGTGCGCGCCAAAAGCGCCTCGTGCTGGAAGACACCC
GTACTGGGCACACACACCTACTCGCCGGCACCCACGCGCTCTTTCAAGACGACGTGCATTATGCGCGTCTAGGCTTGGTC
ATCATCGACGAGCAACACCGCTTTGGCGTCCACCAACGCCTTGCCCTCAAGCAAAAAGGCGCAGTGAACGGCATCCTGCC
GCATCAACTCATCATGACCGCCACCCCCATCCCGCGCACATTGGCGATGAGCGCCTATGCCGATCTGGACACTTCCATCA
TCGACGAACTCCCGCCCGGCCGAACCCCCATCACCACCGTAGCAGTAGACGCCAGTCGCCGCGACGAAATCATCCAGCGG
GTCTACCAAAACTGCAAAACCGGCCGCCAAGCCTACTGGGTCTGCACCCTGATCGAAGAATCCGAAACCCTGCAATGCCA
AGCTGCGGAAGATACCACCGAATACCTGCGCGCCGCCCTCCCCGACCTCCAAATCGGCCTGATACACGGGCGCATGAAAG
CGCGAGAAAAATCACAAGTCATGGAAGCCTTCCAGCAGAACGCGATACAATTGCTGGTTGCAACCACCGTAATTGAAGTC
GGCGTGAACGTGCCCAACGCATCCCTTATGATCATTGAAAATCCGGAACGCCTAGGGCTTGCCCAGCTACATCAGCTGCG
CGGGCGCGTAGGTCGTGGCGCCGCGCAGAGCTTCTGCGTACTGCTCTATCAAAAACCCCTCTCACGCGCGGGCCGCGAAC
GTATTGAAATTATGCGCGAAAGCCACGATGGTTTTGTTATCGCCCAGCGCGATCTAGAGCTGCGTGGCCCCGGAGAAGTG
CTCGGCACCCGCCAAACGGGGGATCTGAACTTCAAAGTGGCCGACTTGCTGCGCGATCAAGACTTGCTGGACGATTGCAA
GGCGCTGGCCGACCATGTTTTGTCTCACCACCCTGACTGCGTGGATACAATCATCCAGCGCTGGCTTGCGCAAGGACTGG
AGTACGGGAGCGTTTAG

Protein sequence :
MTLAVHADSALRSPVQYLKGVGPTLAVLLTRLHIHTVQDLLFHLPFRYQDRTQLTPIATLEGSQEALIQGEVLSCDIHMG
RRRTLAVRITDGSGTLLIRMFHFSATQQKQFAKGQWLRCYGEARVTASGREMVHPEYRLIDDPEQPLTESLTPIYPLTEG
ISQARLLKLTEEALTRLDAHREALELVPEALFQARKLPSLADALHYVHRPPTDANVYQLLNGSHPAQQRLALEEMLAHHL
SLRKLRATIRHHPAPPMPASRELIRGLLQRLPFAPTGAQNRVFAEIEADLQQPAPMLRLVQGDVGSGKTLVAALAALQAI
EAGYQVALMAPTEILAEQHYQNFCEWFEPLGLHTHWLTGKLSARQKRLVLEDTRTGHTHLLAGTHALFQDDVHYARLGLV
IIDEQHRFGVHQRLALKQKGAVNGILPHQLIMTATPIPRTLAMSAYADLDTSIIDELPPGRTPITTVAVDASRRDEIIQR
VYQNCKTGRQAYWVCTLIEESETLQCQAAEDTTEYLRAALPDLQIGLIHGRMKAREKSQVMEAFQQNAIQLLVATTVIEV
GVNVPNASLMIIENPERLGLAQLHQLRGRVGRGAAQSFCVLLYQKPLSRAGRERIEIMRESHDGFVIAQRDLELRGPGEV
LGTRQTGDLNFKVADLLRDQDLLDDCKALADHVLSHHPDCVDTIIQRWLAQGLEYGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-102 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_003811192.1 RecG-like helicases BAC0356 Protein 0.0 62