Gene Information

Name : HDN1F_17810 (HDN1F_17810)
Accession : YP_003811013.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4123
EC number : -
Position : 2236306 - 2237475 bp
Length : 1170 bp
Strand : +
Note : silverDB:HdN1F2356

DNA sequence :
ATGGCCCTTATGTTTCCAAGACTCGCAAGAAATTTTATTAAGAACGGTTATTTTCCAACGGATGAAGACACGTTAAGCCG
AATTCTGAGCGCACTTGCACCACAATCGGATCGCCCCGTGCGGGTGCTTGATCCGTGTTGTGGCGAGGGTGTAGCGCTGG
CCGAGGTGCACCAGCACCTGCTTGCGCAAGGCGCTCAAGTAAGCTCCTTTGGGGTGGAGTACAACGAGGAGCGTGCATGG
CACGCAAAGCGTTTGCTCACACGCTGCATTCACGCAGACTTAAACGACTGCATGGTGGAGTTACGCGCTTTTGGTTTGCT
CTGGCTAAACCCGCCGTATGGCGATTTGCTGAGCGATTTCGAGCATGCCTACACGGGCGGCAAGGAAAAAGGCGGACGCA
AGCGGTTGGAGAAGGAGTTTTGTCGGCGAGCGTTTCCGATGTTACAGGCGGGCGGCGTGCTGGTCTTGATCGTGCCGTAT
AACGTGCTCGATGCGGAGCTGGCTAGCCTAGTTTCCCGTCATTTTGGCGAGGTTTCTGTGTATGCGGCGCCTGAACAACA
GTTTCGGCAAGCCGTGATTTTTGGGGTGAAGCGGGCGCGAGCCTCTGAACCTGAAAAAGCCGTTGTCCAAAAACTCACGC
AGGCGCAAAACAACCTGTATTTCGACACCGATTCTGGCGTCTGGACGGAAGGCTTTTCAATGCACTGCCAGCTTCCGGAA
GTCTGGAACAGAGCGCCGTATGTCGTGCCTGCCTGTCACAGTCACAAGGGGCAAGAGGATGTGCGGTTTTATTCGGTGCG
CGTCGATGTACGTCAACTGGAACAGGAGATTGAACAATCCCCTGTGTTGTGGTCACGGTTTCCCTTGCTGTTTCGAACCC
AAACGGAAACGCGCCGTCAGCCGTTACGCAAGCTGTCCGATTGGCATCTGGCGTTGATGTTGGCTGCGGGGCAAGTCTCT
GGGATCGTTCGCAGCGAATCAGGCCAAGTGCTGCTGGTGAAGGGGGATACCTTTAAAACCAAAAGCATGCGGCAAGAAAC
CGAGATTAACGAATCCACAGGCGATCTTTCGATCACGCGCATTGCAACGGATCGCTTTGTTCCGATGATTCGAGCGCTGG
ATTTCACGCCAGAGAGCCCAAACTTTGGCCGTGTAATCCATATCCAGTAG

Protein sequence :
MALMFPRLARNFIKNGYFPTDEDTLSRILSALAPQSDRPVRVLDPCCGEGVALAEVHQHLLAQGAQVSSFGVEYNEERAW
HAKRLLTRCIHADLNDCMVELRAFGLLWLNPPYGDLLSDFEHAYTGGKEKGGRKRLEKEFCRRAFPMLQAGGVLVLIVPY
NVLDAELASLVSRHFGEVSVYAAPEQQFRQAVIFGVKRARASEPEKAVVQKLTQAQNNLYFDTDSGVWTEGFSMHCQLPE
VWNRAPYVVPACHSHKGQEDVRFYSVRVDVRQLEQEIEQSPVLWSRFPLLFRTQTETRRQPLRKLSDWHLALMLAAGQVS
GIVRSESGQVLLVKGDTFKTKSMRQETEINESTGDLSITRIATDRFVPMIRALDFTPESPNFGRVIHIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13405.1 hypothetical protein Not tested PAGI-5 Protein 2e-67 47
EXA73 ABD94681.1 O-methyl transferase family protein Not tested ExoU island A Protein 1e-68 47
RL064 AAP84189.1 plasmid related protein Not tested PAPI-1 Protein 2e-67 47
ORF C74 AAN62168.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 3e-64 46
ORF SG83 AAN62304.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 1e-64 44
pph66 CAI36107.1 Adenine-specific DNA methylase Not tested PPHGI-1 Protein 4e-63 44