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Name : HDN1F_17280 (HDN1F_17280) Accession : YP_003810961.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2183119 - 2184300 bp Length : 1182 bp Strand : - Note : silverDB:HdN1F2285 DNA sequence : ATGTCATCGGCCAGAGCAAACTCTGCTCTATCAGCTCGTGCAAACCCATTACCCCGAATTTTGTGCCCAACTCGACGCGC AGGGGCGCAGAGCATGAGCGCCTGGTTGCTTTCAGTTGCAAGCGAAGGGGAAATAGTCTATCGCACCCTGGCCACGCACT TGATCAGGAAAGCTGGGTTCAACAAGCACAGCGCACAAACCGGAGCCGTCACCCTGATTCAGCGCTTTGGCTCGGCTTTG AACCTGAATTTACACTTTCACATGCTGTTTCTCGACGGCGTTTATGCCGAGGATCAATACGGTGCCATGCGCTTTCACCG CGTCAAGGCTCCCACACGGGAAGAATTGGGTGCCTTGGTGCATCAACTCAGCCAGCGTGTCAGCCGGTATCTGGAAAAGA AAGGCTGGTTGCAACGAGATATGGAAAACACCTATCTGCTATTGGATGGTGATGATGATGCGCTGCTTCAATTTCAGGGA TATTCCGTTACCTACAGGATTGCCTTCGGGCCACAGGCCGGGCGCAAGGTGCTCAGCCTGCAAAGTATTCCACCAGCACC TGCCAAAGAATCAGATCGGGTGGCCAAACAGGCGGGCTTTTCCCTCCATGCCGGTGTCATGGCCGACAGCCAGCAGAAAG AGTTGCGTGAACGGCTATGCCGCTATATTTCCCGGCCTGCGGTGTCGGAAAAGCGGTTGGCGCTCACGAGTCAAGGCAAG GTTCGCTATGAACTCAAAACTCCTTACCGTGATGGCACCACCCATGTGTTTTTTGAGCCTCTGGACTTCATTGCACGCCT GGCCGCCTTGGTTCCCAGGCCGCGGGTGAATCTGACGCGGTTCCACGGCCTTTTCGCACCCAACAACAAGCATCGCGCCT TGGTTACGCCGGGGAAGCGGGGTAAGGGAAGAAAGCCGACGGAAGTGGAGTGCACACAGGAAAAAACTATTGAGGAGCGC CGTAATGCGATGACCTGGATGCAGCGGCTCAAGCGTGTCTTCAACATTGATATCGAGCAATGTGAACACTGCGGTGGCCA CGTCAAAGTCGTTGCATGCATCGAAGACCCTGCCGTGATCGAGAAGATCCTGCAACATCTGGCACTGAAAGAATCACCAT CGCTGGCACGCGTCAATGATGCAAGAGGGCCACCGGATCAGTCGGTTCTGTTTCAGTGCTAA Protein sequence : MSSARANSALSARANPLPRILCPTRRAGAQSMSAWLLSVASEGEIVYRTLATHLIRKAGFNKHSAQTGAVTLIQRFGSAL NLNLHFHMLFLDGVYAEDQYGAMRFHRVKAPTREELGALVHQLSQRVSRYLEKKGWLQRDMENTYLLLDGDDDALLQFQG YSVTYRIAFGPQAGRKVLSLQSIPPAPAKESDRVAKQAGFSLHAGVMADSQQKELRERLCRYISRPAVSEKRLALTSQGK VRYELKTPYRDGTTHVFFEPLDFIARLAALVPRPRVNLTRFHGLFAPNNKHRALVTPGKRGKGRKPTEVECTQEKTIEER RNAMTWMQRLKRVFNIDIEQCEHCGGHVKVVACIEDPAVIEKILQHLALKESPSLARVNDARGPPDQSVLFQC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Pmu_02840 | YP_005176185.1 | ISCR2 transposase | Not tested | ICEPmu1 | Protein | 1e-92 | 60 |
| rcr2 | AEQ20907.1 | mobilization protein | Not tested | Tn6166 | Protein | 1e-92 | 60 |
| rcr2 | AEZ06047.1 | Rcr2, mobilization protein | Not tested | Tn6167 | Protein | 1e-92 | 60 |
| ABK1_0256 | YP_005512828.1 | Putative transposase | Not tested | AbaR4d | Protein | 1e-92 | 60 |
| BJAB07104_00280 | YP_008207745.1 | hypothetical protein | Not tested | AbaR25 | Protein | 1e-92 | 60 |
| BJAB0868_00284 | YP_008211610.1 | hypothetical protein | Not tested | AbaR26 | Protein | 1e-92 | 60 |
| ABZJ_00263 | YP_005524219.1 | putative transposase | Not tested | AbaR22 | Protein | 1e-92 | 60 |
| tnpA of ISCR2 | AFH57204.1 | transposase | Not tested | AbaR4a | Protein | 8e-93 | 60 |
| ABTW07_0267 | YP_005797163.1 | putative transposase | Not tested | AbaR4e | Protein | 1e-92 | 60 |
| unnamed | AAK02053.1 | putative transposase-like protein | Not tested | SGI1 | Protein | 1e-69 | 50 |
| rcr3 | AGK06976.1 | Rcr3 | Not tested | SGI1 | Protein | 1e-69 | 50 |
| rcr3 | AGK07106.1 | Rcr3 | Not tested | SGI1 | Protein | 1e-69 | 50 |
| rcr3 | ACS32047.1 | Rcr3 | Not tested | SGI2 | Protein | 1e-69 | 50 |
