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Name : HDN1F_16580 (HDN1F_16580) Accession : YP_003810893.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Unknown Product : peptide ABC transporter fused ATPase domains Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2097701 - 2099317 bp Length : 1617 bp Strand : - Note : silverDB:HdN1F2189 DNA sequence : ATGCGCCCTACCACGGATACCGCTCCACTCCTAAAAATAGATCAGCTTGTTGTCAGCTTTGACCAGAACGGTACGGTTGT TCCTGCGGTGCAAGGTGTCTCATTGCAAGTGAATCGAGGTGAAACGCTCGCGCTCGTCGGCGAAAGCGGCTCGGGGAAAT CGGTAACCGCAAACACGATCTTGAGGCTGCTTCCTAAAAAGTCTAGCAGCATCCAAGGCTCAATTCAGTTCGAAGGAAAA GAGCTCACTGCTTATAGCGAGGTTGCGCTACAGATGATTCGAGGCGCATCCATCGCAATGATCTTCCAGGAGCCAATGAC TGCACTAAACCCTTTGCATACGGTTGAGCGGCAAATCGGCGAAGTGTTAAACCTCAGGAAAACCGTTACTCCAAAGGAAC GACGTAACAAGATCCGTGAGCTGCTCGCGCAGGTGGAAATACCCGAACCAGAAAAACGCCTCAAAAGCTATCCGCACCAA CTCTCCGGCGGCCAAAGGCAACGGGTAATGATTGCCATGGCGATCGCCAATCAGCCCAAACTACTGATCGCCGATGAGCC CACCACCGCGCTCGACGTTACCATCCAGAAGCAGATCCTAGAACTGATTCGGAGACTGCAAAAGAACACCGGTATGGCAG TGCTTCTGATCACGCACGACCTTGGGGTTGTTCGCCATTTTTCGGATCGTGTGGCGGTCATGCGCCACGGAAAAATTGTT GAACACAATGAGACCCAAGCGCTGTTTACTCACCCCAAAGACGAATACACGCGGATGCTGCTCGACGCCGAACCCCATGG CGCACCTGCTCCAGTGCCAGAAAACGCCGAATTAGTCGCAATGACGAAGGACCTGCGTATCTGGTACCCCATTAAGAGAG GTCTGTTCCAGCAAACCGTAGGGCATGTGAAGGCCGTCGACGACATCTCTCTTACCCTACGTAAGGGCGAAACACTCGGA ATCGTGGGTGAAAGCGGTTCAGGCAAAACCACTCTGGCTCAGGCAATTCTGCGCTTGATCAGCTCCGAGGGCGTAATCAA TGTTCACAATGTACCAATTCACCGCATGAGCAGAAAACTGTTGCGCCCCTACAGGCGTATCATGCAAATCGTTTTTCAGG ATCCATTTGCAAGCCTTAGCCCCAGAATGAGCGTCTCCCAGATCGTTGCAGAGGGATTGGAAATTCACCACCACCTATCC CGCAAGGAGAGAGAAGCGCGCGTCGCCGATACCCTGCGCGACGTTGGTCTACCGGAAGACTATAGCCACCGCTTTCCGCA TGAACTCTCTGGCGGGCAGCGCCAGCGCGTTGCCATTGCGCGCGCACTGATCTTAAAGCCCGAAATTATCGTTCTTGATG AACCGACCTCTGCACTCGATCGCTCCATCCAAGCGCAGGTCATTGAATTGCTGCGAAATCTGCAGAAAAAATACGAACTA AGTTATCTTTTCATCAGCCACGATCTAAAAGTCGTGCGTGCGATGTCTCACCAAATATTGGTGATGAAAAACGGAAAAGT GGTGGAAACTGGTAACGCAGAGGATGTGTTCCAGAATCCGCAAACGGAATACACTCGCCAGTTACTTTCTGCCGCGTTTA TTTCGGATTCCGTGTAA Protein sequence : MRPTTDTAPLLKIDQLVVSFDQNGTVVPAVQGVSLQVNRGETLALVGESGSGKSVTANTILRLLPKKSSSIQGSIQFEGK ELTAYSEVALQMIRGASIAMIFQEPMTALNPLHTVERQIGEVLNLRKTVTPKERRNKIRELLAQVEIPEPEKRLKSYPHQ LSGGQRQRVMIAMAIANQPKLLIADEPTTALDVTIQKQILELIRRLQKNTGMAVLLITHDLGVVRHFSDRVAVMRHGKIV EHNETQALFTHPKDEYTRMLLDAEPHGAPAPVPENAELVAMTKDLRIWYPIKRGLFQQTVGHVKAVDDISLTLRKGETLG IVGESGSGKTTLAQAILRLISSEGVINVHNVPIHRMSRKLLRPYRRIMQIVFQDPFASLSPRMSVSQIVAEGLEIHHHLS RKEREARVADTLRDVGLPEDYSHRFPHELSGGQRQRVAIARALILKPEIIVLDEPTSALDRSIQAQVIELLRNLQKKYEL SYLFISHDLKVVRAMSHQILVMKNGKVVETGNAEDVFQNPQTEYTRQLLSAAFISDSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-94 | 46 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-94 | 46 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-94 | 46 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-94 | 46 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-106 | 42 |
