Gene Information

Name : qacE2 (HDN1F_14560)
Accession : YP_003810692.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Resistance
Product : Quaternary ammonium compound resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 1817935 - 1818267 bp
Length : 333 bp
Strand : -
Note : silverDB:HdN1F1922

DNA sequence :

ATGAACTGGTTACTACTCGGCATTGCCATCCTCAGCGAAGTCATCGCCACCTCTGCGCTAAAGTCCTCCGAAGGCTTCAC
CCGTTTATGGCCCTCCGTCATCGTAATTGCAGGCTATACCTCGGCGTTCTATTTTTTGTCCCTCACCCTGAAATCCATCC
CCATAGGCATCGCTTATGCAGTCTGGTCAGGCGCAGGGGTCGCACTGATTGCAGTGATCGGGTGGGTCATGTTCGGGCAA
AAACTGGATTTCGCCGCCGGCATCGGGATTGGACTGATTGTGGCCGGGGTAGTTGTACTCAACGTGTTTTCGGGTGCATC
GTCGCATTCGTAA

Protein sequence :

MNWLLLGIAILSEVIATSALKSSEGFTRLWPSVIVIAGYTSAFYFLSLTLKSIPIGIAYAVWSGAGVALIAVIGWVMFGQ
KLDFAAGIGIGLIVAGVVVLNVFSGASSHS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
qacEdelta1	AGK06979.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacE-delta1	ACY75532.1	QacE-delta1	Not tested	Tn6060	Protein	6e-21	70
qacEdelta1	ABB48428.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	AGK07016.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacE-delta1	AET25389.1	QacE-delta1	Not tested	PAGI-2(C)	Protein	6e-21	70
qacEdelta1	ABZ01839.1	QacEdelta1	Not tested	SGI2	Protein	6e-21	70
ACICU_00227	YP_001844886.1	membrane transporter	Not tested	AbaR20	Protein	8e-21	70
qacEdelta1	AGK07074.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacE-delta1	AFG30112.1	QacE-delta1	Not tested	PAGI-2	Protein	6e-21	70
qacEdelta1	CAJ77030.1	Quaternary ammonium compound-resistance protein	Not tested	AbaR1	Protein	6e-21	70
qacEdelta1	YP_005797134.1	quaternary ammonium compound-resistance protein	Not tested	AbaR4e	Protein	8e-21	70
qacEdelta1	AGK07100.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	AGF34989.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	CAJ77049.1	Quaternary ammonium compound-resistance protein	Not tested	AbaR1	Protein	6e-21	70
qacEdelta1	YP_005797150.1	quaternary ammonium compound-resistance protein	Not tested	AbaR4e	Protein	8e-21	70
qacEdelta1	AGK07109.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	AGF35028.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	CAJ77052.1	Quaternary ammonium compound-resistance protein	Not tested	AbaR1	Protein	6e-21	70
ebr	YP_006098377.1	putative ethidium bromide resistance protein	Not tested	Tn2411	Protein	8e-21	70
qacEdelta1	AFV53123.1	QacEdelta1 multidrug exporter	Not tested	AbGRI2-1	Protein	6e-21	70
qacEdelta1	AGF35063.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	CAJ77088.1	Quaternary ammonium compound-resistance protein	Not tested	AbaR1	Protein	6e-21	70
qacEdelta1	ACN81026.1	QacEdelta1	Not tested	AbaR5	Protein	8e-21	70
qacEdelta1	AGK36647.1	QacEdelta1	Not tested	AbaR26	Protein	6e-21	70
qacEdelta1	AGK06933.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacE-deltal	ACF06159.1	quartenary ammonium compound resistance protein	Not tested	Tn5036-like	Protein	6e-21	70
qacEdelta1	AAK02047.1	quaternary ammonium compound and disinfectant protein	Not tested	SGI1	Protein	6e-21	70
qacEdelta1	AGK06970.1	QacEdelta1	Not tested	SGI1	Protein	6e-21	70
qacE-delta1	ACY75523.1	QacE-delta1	Not tested	Tn6060	Protein	6e-21	70
qacEdelta1	AAK02056.1	quaternary ammonium compound and disinfectant protein	Not tested	SGI1	Protein	6e-21	70

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0324	Protein	3e-23	70
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0322	Protein	4e-22	70
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0323	Protein	3e-21	70
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0002	Protein	3e-21	65
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	NC_010410.6003348.p0	Protein	3e-21	65
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0150	Protein	1e-16	59
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	NC_002695.1.913273.p	Protein	1e-16	59
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0377	Protein	9e-16	57
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	CP001138.1.gene1489.	Protein	4e-16	55
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	CP004022.1.gene1549.	Protein	1e-14	51
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0140	Protein	1e-14	51
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0139	Protein	2e-11	50
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	AE000516.2.gene3301.	Protein	2e-10	49
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0249	Protein	2e-10	49
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0325	Protein	2e-15	45
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0329	Protein	1e-14	45
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0477	Protein	2e-08	44
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0327	Protein	1e-15	43
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0378	Protein	2e-08	42
qacE2	YP_003810692.1	Quaternary ammonium compound resistance protein	BAC0321	Protein	8e-13	41