Gene Information

Name : HDN1F_13530 (HDN1F_13530)
Accession : YP_003810589.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : aspartate aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1684345 - 1685628 bp
Length : 1284 bp
Strand : -
Note : silverDB:HdN1F1785

DNA sequence :
ATGCCGCGTTCTAAGCGATTGCTAACCGTTAACCGAAAGAAGTGGTACCTCATCATGAAGCCCGTAAAAAAATCAACCAA
GCTCCACAACGTTTGTTACGACATTCGCGGGCCTGTGTTGGCACACGCGCGCAAATTGGAGGAGGACGGGCAAAGAGTCA
TCAAGCTAAACATCGGCAACCCCGCACCTTTTGACTTTGTACCACCCGATGAAATCGTACAGGATGTGATTGCCAACCTG
CCGAATGCATCTGGCTATTGTGATTCCAAAGGGCTCTTTAGCGCACGCAAAGCAGTCATGCAGGATTGCCAAAAGAAAGG
CATTGCTAACGTAGGGATCGACGAGATCTATCTGGGGAACGGCGCGAGCGAGCTGATCGTAATGTCGATGCAGGCACTCA
TTAACAATGGGGATGAAGTCCTCATTCCAATGCCTGACTATCCACTCTGGACGGCCGCAGTGAGCCTCGCTGGCGGAAAA
GCCGTTCACTATCTATGCGACGAACAGGCCGAGTGGTATCCCGATTTAGAGGACATCCGCAACAAGGTCAACGAACGTAC
CAAGGCAATTGTGATTATCAACCCCAATAATCCCACTGGAACCGTCTATCCTCCAGAGATTCTTGAGGGCATGATCGAGA
TCGCTCGCCAGCACAATCTTGTCGTGTTTTCAGATGAAATTTACGACAAGATTCTCTACGACGATGCGCACCACGTTTCC
ACCGCATCGCTCGCAGACGATCTATTGTTCGTAACGCTCAACGGCCTCTCCAAAACCTACCGAGCCGCAGGCTACCGCTC
TGGATGGATGATTCTTTCCGGCAATATCCGCGATGCACGCGACTATATAGAAGGCTTGGAGATGCTTTCCTCCATGCGTC
TCTGTGCGAACGTACCGTCTCAATACGCCATTCAAACCGCACTCGGCGGATACCAGAGTATTTACGAACTCACCAAACCC
GGCGGGCGCCTGCACCGCCAGCGCGATACCGCGTGGCGGCTGCTCAATGAAATTCCTGGGGTAAGCTGCGTGAAGCCACG
CGCAGCGCTGTATATGTTCCCCAAACTGGATCCAAAGGTTTATCCGATCACTAACGATCAGGATTTCATTCTGGATCTGC
TGGTGCAGGAAAAAGTTCTGGTCGTCCAAGGCAGCGGCTTTAACTGGCCAGCCCCCGATCACTTCCGCGTAGTGTTTCTA
CCGCGCGAAGAAGATCTGGTAGACGCAATCGGACGAATCGCACGCTTCCTAGAACGCTATCGCAACCAGCATCGCCAAGG
CTAA

Protein sequence :
MPRSKRLLTVNRKKWYLIMKPVKKSTKLHNVCYDIRGPVLAHARKLEEDGQRVIKLNIGNPAPFDFVPPDEIVQDVIANL
PNASGYCDSKGLFSARKAVMQDCQKKGIANVGIDEIYLGNGASELIVMSMQALINNGDEVLIPMPDYPLWTAAVSLAGGK
AVHYLCDEQAEWYPDLEDIRNKVNERTKAIVIINPNNPTGTVYPPEILEGMIEIARQHNLVVFSDEIYDKILYDDAHHVS
TASLADDLLFVTLNGLSKTYRAAGYRSGWMILSGNIRDARDYIEGLEMLSSMRLCANVPSQYAIQTALGGYQSIYELTKP
GGRLHRQRDTAWRLLNEIPGVSCVKPRAALYMFPKLDPKVYPITNDQDFILDLLVQEKVLVVQGSGFNWPAPDHFRVVFL
PREEDLVDAIGRIARFLERYRNQHRQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-121 59
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-121 59
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-121 59
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-121 59