Gene Information

Name : HDN1F_13450 (HDN1F_13450)
Accession : YP_003810581.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1752
EC number : -
Position : 1672101 - 1673147 bp
Length : 1047 bp
Strand : -
Note : silverDB:HdN1F1776

DNA sequence :
ATGCAACCTGCTGACAAACTTGGCCTCGTGCTCTCGGGCGGAGGCGCTAAGGGCGCATACCACGTCGGCATGGTGCGCGC
CCTCAACGAGCTTGGAAGCCACGTAAACGCAATCGCTGGAGCAAGTATCGGCGCATTAAACGGCTGCATATTGGCGAGCG
CACCTAATTTTGAAGAAGGGCATCGTCGCCTTGAAACGCTCTGGAACACACTACAAGCACGGTCGCCAATTAAGACCAAA
AAATCAAGCTATCTAAAAATACTAGCGGCAAGCGCGGCCATTCTAGCACCACAAGCTCGCATTTTAACTGTACTTTCTGC
AATCGGTCAATTTTCAGAAGAAGACTCAATTTTATCAAATGAGCCACTGCTCGAATTACTTGAAGAATATTTCGATGTCG
AGGCGTTACAGAGCGGCCTTCCACTTTACGTTTCAGTATTTCCGAGTTTTAGCGGAATAATCGACATTGTTGGTGACGTG
CTTGCAGCGCTCGGCATAAGAGATACGCCGAACTCCGATTTTTTACACGTACAGTCGCTATCACCGAGCGACCAAAAGAA
AGTGCTTATGGCTTCGGCAGCGCTTCCCGTCCTTTTCGAAGCACAAAAAGTTAATGGCCGCACCTATACTGATGGTGGGC
AAGGTGGTTGGTCAAAATCCCAAGGGAACACCCCCATCCAGCCTCTCATTGACGCGGGCTGCACCAGAATTATCGTCAAC
CACTTGAGCGACGGTTCGCTTTGGAGTCGCCACGATTTTCCGACGGCAGCCATTATTGAAGTTAGGCCGCTAGAGCGCAT
TTCACGCAGTGAATGCCTATTCGGTGAAGCGAAGGATTTACTTGGATTTAATGGCGAGAAAATCCCATCATGGATTTCGC
AAGGCTACGAAGATACGATACGCTGCGTTGGGCGTGTAAAAAATTCCATCGAAGCATACGGCGAAATCGAAAAATCAAAA
GCTGCACTGAGCGAGAGCTTGAAGCACGGCGCCAAAGCCGATCTTCAACTTGAAGATCGAATGAAAAAATTAGATGGGTT
TGAATGA

Protein sequence :
MQPADKLGLVLSGGGAKGAYHVGMVRALNELGSHVNAIAGASIGALNGCILASAPNFEEGHRRLETLWNTLQARSPIKTK
KSSYLKILAASAAILAPQARILTVLSAIGQFSEEDSILSNEPLLELLEEYFDVEALQSGLPLYVSVFPSFSGIIDIVGDV
LAALGIRDTPNSDFLHVQSLSPSDQKKVLMASAALPVLFEAQKVNGRTYTDGGQGGWSKSQGNTPIQPLIDAGCTRIIVN
HLSDGSLWSRHDFPTAAIIEVRPLERISRSECLFGEAKDLLGFNGEKIPSWISQGYEDTIRCVGRVKNSIEAYGEIEKSK
AALSESLKHGAKADLQLEDRMKKLDGFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67356.1 unknown Not tested PAI II CFT073 Protein 8e-56 42
APECO1_1097 YP_853116.1 esterase Not tested PAI IV APEC-O1 Protein 4e-53 41
Z1214 NP_286749.1 hypothetical protein Not tested TAI Protein 1e-53 41
Z1654 NP_287157.1 hypothetical protein Not tested TAI Protein 1e-53 41