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Name : HDN1F_11660 (HDN1F_11660) Accession : YP_003810403.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Virulence Product : type I restriction-modification system restriction subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1442220 - 1445273 bp Length : 3054 bp Strand : + Note : silverDB:HdN1F1524 DNA sequence : ATGGTTAGCAACACCAACGAACAGGCGCTGGAGGCTGCGATTGAGCAGGCTTTAACCGGTACCACCTCAGAAGCCGTCAA GGCAGCGGGTGGCGTTGCCGATGGGTCAGATGCTCAGGTCAAGGAGACGCCTGCTGACTATCTGGTCGGCAATCAGCGCT TCAAGCTGGGCCTGCCCACCGATTTTAACGCCCAGTACGCGCTTGATGAAAAGCTGTTCTGGCGCTTTCTGGAGCATACC CAGAAGCCTGAGCTGACCAAGCTGCAAAAGCACAATCCATCGGACTGGCAGCGCAAGTTGCTGGAGCGTTATGACCGGCT GATGAAAAAGCACGGGATTCTCCACCTGCTCAAGAAGGGGCTGCCGGTAGACGACGCCCACTTCCATCTGATGTATCCGG CTCCCCTGGCCAGCAGTAGCGAAAAGGTTAAGCAGAACTTTGCGGCCAATATTTTCAGCTGTACCCGGCAGGTACGATAC TCCCTAGCCAACCCGCTCCAGGAAATCGACATGGTGCTGTTCCTGAACGGCATCCCACTGGTGACCATGGAGTTGAAAAA CGCCTGGACCGGCCAAACCGCCCGCTACCACGGGCAGAAGCAGTACCGGGAAGACCGCGACGTAAACCAGCCGTTACTGA ACTTCGCGCGCTGTTTGGTGCATATGGCTGTAGACACCGATGAGGTGTACATGACCACTAAGCTGGCCGGGCAAGCGACG TACTTTTTGCCGTTTAACAAGGGCCACAACCATGGGAAAGGCAATCCTCCCAACCCGCATGGCCATAAGACGGCGTATCT ATGGGAGGAGGTGTTTACCAAGGAAAGCATTGCCAACATCATCCAGCACTTTGTAAGGCTGGATGGTAGCACTAAAGATC CTCTGCCCAAGCGCACACTGTTCTTCCCCCGTTACCATCAGTTGGATGTGGTGCGTAAGCTGGTTGATCATGCGTCTAAC CAGGGTGTTGGCCATACCTATTTAATTCAGCACTCTGCTGGTTCCGGCAAATCCAATTCCATTACCTGGGCGGCCTACCA GCTTATCGAAACCTACCCGGCTTCACAGCAAGTTGCGAATGGGAGAAGCATCGAGCAGCCTCTGTTTGACTCGGTTATCG TCGTGACGGATCGCCGACTGTTGGACAAACAGCTGCGGGATAACATCAAGGAATTCTCCGAGGTTAAAAATATTGTTGCT CCGGCCCATAAGTCTTCTGAGCTGAAGAGCGCACTGGAGAACGGCAAAAAGATCATTATCACTACTATTCAGAAGTTCCC GTTTATTGTAGATGGCATTGAAGACCTCAGTGATAAACGCTTTGCAGTGATCATTGACGAAGCCCACAGCTCACAATCAG GTACTGCTCACGACAATATGAATCGTGTGATGGGGCAGGACGAGGAAGAGGACGATCAGGACAAGATCCTCAAAGCCATG AAATCCCGCAAGATGCGTGGCAATGCGTCCTACCTGGCTTTCACAGCTACGCCCAAGAACACCACCCTGGAAAAGTTTGG TGAAAAGCAGGAAGACGGTACATTCACACCCTTCCACTTGTACTCCATGAAGCAGGCCATCGAGGAAGGTTTTATTCTGG ATGTACTCGCCAATTACACCACCTATAAAAGTTATTACGAGATCGAAAAGTCCATCGCGGAAAACCCGGAATTCGATACC AAAAAGGCGCAGAAGAAACTGCGCACCTATGTAGAGCGTAGCCAGCAGACGATTGATACCAAAGCTGAAATCATGCTGGA GCACTTCATCCCGCAGGTTGTCAATGCCAAGAAGCTCAAGGGCAAAGCCAAAGGCATGGTGGTGACGCAGAATATTGAAA CGGCCATTCGTTACCACAAGGCTATTACGCGCTTGCTGGAAGCCAAAGGTAATCCCTTCAAAGCCTTGGTAGCCTTTTCT GGAACGAAAGAAGTGGATGGTATTGAATATACGGAAGCGGAGATCAATGGGTTTTCGGAATCTGATACCAAGGACAAGTT CGATACCGATGAATACCGCTTGCTCGTGGTGGCCAATAAGTACCTCACCGGATTTGATCAGCCCAAGCTGTGCGCCATGT ATGTGGACAAAAAGCTGGCATCGGTACTTTGTGTTCAGACTCTTTCTCGCCTGAACCGCTCTGCACCGAAACTAGGTAAA AAGACTGAAGACCTGTTCATTCTGGATTTCTTCAACTCAGTTGATGATGTGAAGACCGCGTTTGACCCCTTCTATACAGC GACATCCCTGTCTCGTGCCACGGACATTAACGTGCTCCATGAACTCAAGGACGCAATGGACGACGTGGGTGTGTATGAGT GGTATGAGGTAGAGGACTTCGTAAAGCGTTACTTTAACAACGAAGATGCGCAAACATTAAGCCCCATCATTGATGTGGCT GCTGCCCGTTTCGAGCATGAGCTGGAGTTGGAAGACGACGAAAAGGTCGATTTCAAAATCAAGGCTAAGCAGTACGTAAA AATCTACGGGCAGATGGCATCCATCATGCCCTATGAAATTGTTGCATGGGAAAAGCTATTCTGGTTCCTGAAGTTCCTCA TACCCAAGCTGAAGGTGGCAGACCCGGATGCGGACACTATCGACGAACTATTGGAATCCGTTGATTTGAGTTCCTATGGC CTGCAAAGGGTCAAGCTGAATCACACTATCAAACTGGATGAGGCAGATACTGAGCTCGACCCTCAGAATCCAAATCCTCG TGGTGCCCATGGTGTAGATAAGCAAACCGATCCTTTGGACGACATTATCCGGACTTTCAATGAACGCTGGTTCCAGGGTT GGAGCGCAACACCTGAAGAGCAAAAAGTTAAGTTTATCAATATTGCCGAGAGCATCAAACAGCACCCGGATTTTGAGGCT AAATATCAGAATAATCCTGATCCACATAATCGAGAGCTGGCATTCGAAAAAATGCTTAAGGAAGTGATGTTGCGTAGGCG GAAAGATGAGTTGGAGCTTTACAAATTGTTCGCTGGGGACGCCGCCTTTAAAGCTGCGTGGATGCAGAGTATGCAGCGGA TGATCGGCGAGTAA Protein sequence : MVSNTNEQALEAAIEQALTGTTSEAVKAAGGVADGSDAQVKETPADYLVGNQRFKLGLPTDFNAQYALDEKLFWRFLEHT QKPELTKLQKHNPSDWQRKLLERYDRLMKKHGILHLLKKGLPVDDAHFHLMYPAPLASSSEKVKQNFAANIFSCTRQVRY SLANPLQEIDMVLFLNGIPLVTMELKNAWTGQTARYHGQKQYREDRDVNQPLLNFARCLVHMAVDTDEVYMTTKLAGQAT YFLPFNKGHNHGKGNPPNPHGHKTAYLWEEVFTKESIANIIQHFVRLDGSTKDPLPKRTLFFPRYHQLDVVRKLVDHASN QGVGHTYLIQHSAGSGKSNSITWAAYQLIETYPASQQVANGRSIEQPLFDSVIVVTDRRLLDKQLRDNIKEFSEVKNIVA PAHKSSELKSALENGKKIIITTIQKFPFIVDGIEDLSDKRFAVIIDEAHSSQSGTAHDNMNRVMGQDEEEDDQDKILKAM KSRKMRGNASYLAFTATPKNTTLEKFGEKQEDGTFTPFHLYSMKQAIEEGFILDVLANYTTYKSYYEIEKSIAENPEFDT KKAQKKLRTYVERSQQTIDTKAEIMLEHFIPQVVNAKKLKGKAKGMVVTQNIETAIRYHKAITRLLEAKGNPFKALVAFS GTKEVDGIEYTEAEINGFSESDTKDKFDTDEYRLLVVANKYLTGFDQPKLCAMYVDKKLASVLCVQTLSRLNRSAPKLGK KTEDLFILDFFNSVDDVKTAFDPFYTATSLSRATDINVLHELKDAMDDVGVYEWYEVEDFVKRYFNNEDAQTLSPIIDVA AARFEHELELEDDEKVDFKIKAKQYVKIYGQMASIMPYEIVAWEKLFWFLKFLIPKLKVADPDADTIDELLESVDLSSYG LQRVKLNHTIKLDEADTELDPQNPNPRGAHGVDKQTDPLDDIIRTFNERWFQGWSATPEEQKVKFINIAESIKQHPDFEA KYQNNPDPHNRELAFEKMLKEVMLRRRKDELELYKLFAGDAAFKAAWMQSMQRMIGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 77 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 77 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HDN1F_11660 | YP_003810403.1 | type I restriction-modification system restriction subunit | VFG1098 | Protein | 0.0 | 77 |
