Gene Information

Name : wbiI (HDN1F_10500)
Accession : YP_003810290.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Virulence
Product : epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 1309919 - 1311901 bp
Length : 1983 bp
Strand : +
Note : silverDB:HdN1F1374

DNA sequence :
ATGCCAATCAGTCGGCAAAATATCATTGCGCTATCGCGCACTTACAAGCAGGCGATTGCCTGTGTTGCGGATGTGTTTAC
GCTGTTCGCAGCACTATTAAGTGCTTATCTGTTGCGCCTCGAAACAGTAATCTTTCCTCGTTCTGGGATCGAGTATCTTG
CGCTATGGGCTTTGCCCATTGCCGCGGCGCTTTTGCTTTATTGGCGGATGGGGCTTTATAAATCGCTCGTTCGGTTTTTA
AGCTGGCGTGGTGGCGTGGTCATCTGTGCTGGCGCGGCCTTGGCGGGTATCGTCCACTATGTGGCAGCAGATTTTCTTAG
CACCAATTGCCCGACTTCAGTGCCGGTAATCTTTGCATTGCTGGGAATGGGTGGCGTGGCTGGAACGCGGAGCGCTTTTC
GGCTGTGGTTTGTGCATGGGCTCACCGAGCAGAACGAACGCGTCATTATTTATGGTGCAGGGCCAGGTGGAATTTCCTTG
GTTTCAGCCTTGCATCAAGGGTCTGTTTTTACGCCGGTAGCATTGGTTGATTCGCGGGTTGAAAAGCAAAAGACCTTTAT
TCATGGTTTGTATGTTTATTCGGTTGGGCAATTGCCGTGGCTGATCGCAGAGCATGAAGTCAGCCGTATTTTCTTGGTGA
TGGAGAATCTCTCACGTGCTGAGCGCGCCGAAATACTCCAAACTTTAGAGTCGCTTTCGGTGCGTGTTCAGACGGTTCCT
TCTATGGCGGATGTGATCAGTGGACGGGCGCGGATTTTAGATCTTCGTGATGTTGATGTTGAGGATTTGCTGGGGCGTGA
CCAGATTCAGCCGGATCAGCTACTCATGCAGCGCTGCATTCGTGGCAAGGTGGTCATGGTTACGGGGGCTGGTGGGTCGA
TTGGTTCAGAGCTGTGTCGGCAGATTATCACCCAGAAACCAGCTCGTTTAGTGATCGTAGATAGCTCCGAATATGCGCTG
TATCATATTGATCAGGAACTCCGGAAGCTGAACCCTTCGCTGGTCGCGGCTTCAGGTGAATCTGTCGTTGTGCCTTTGTT
GTGCTCTGTTCAGAAAGAAAATCGTATTGAAGTCATCATGCGAACCTTTGGTGTGCAAACCGTCTACCACGCCGCAGCTT
ACAAGCATGTGCCGATGGTGGAGCATAATATTGTTGAGGGTGTGCGTAACAATGTCTTTGGAACGTGGTATTCAGCAGAA
GCAGCAATACGTGCGGGCGTTGAAACCTTCGTTTTGATTTCGACGGATAAGGCTGTTAGGCCCGCGAACGTAATGGGTGC
TAGCAAGAGGATGGCGGAGCTTGTGTTGCAGGGGCTTGCTTCTCGACAGAAGAAAACCCGGTTTTGCATGGTCCGGTTTG
GGAACGTGTTAGGCTCATCAGGCTCGGTGGTGCCGTTGTTCCAAGAGCAGATCCTTTCCGGAGGGCCGGTCACAGTTACC
CACCCAGACGTTATGCGCTATTTTATGTCGATTCCAGAAGCTGCGCAGCTGGTAATCCAAGCAAGTGCGATGGGCTTGGG
AGGCGAAGTATTTTTGCTGGATATGGGAGCGCCCGTCCGAATTGCGGATTTAGCGCGTCGCATGGTGCACCTAATGGGAT
ACCGCGTTCGGCAGCAAGGTGTGGCTTTTGATGTGCGCCAGGGAGCAATGGAAAGCGGCATTGAAATTGCGTACACAGGA
TTGCGCCCAGGGGAAAAACTTTATGAAGAACTGCTCATTGGGCACGACTCAGAAATAACCGACCACCCGCGCATTCTGAA
AGCACGCGAAGCATCCCTTGCATGGGTTGAGGTGGCGGCACTGATGACAGAACTGGATCGTGCGTGTCATGTGTTTGATT
GTGAGCGTGTCTGCGAAATATTGAGGCGTGCACCAACGGGGTTCCTTCCTGTCAGCAAGAGTGAAGACCTCGTGTGGCAG
GAGCATTTAAAGGGTGTTGCTCACTTGGACATGGTTCGGCCTCTTGCCAGCGTGGGCCGCTAG

Protein sequence :
MPISRQNIIALSRTYKQAIACVADVFTLFAALLSAYLLRLETVIFPRSGIEYLALWALPIAAALLLYWRMGLYKSLVRFL
SWRGGVVICAGAALAGIVHYVAADFLSTNCPTSVPVIFALLGMGGVAGTRSAFRLWFVHGLTEQNERVIIYGAGPGGISL
VSALHQGSVFTPVALVDSRVEKQKTFIHGLYVYSVGQLPWLIAEHEVSRIFLVMENLSRAERAEILQTLESLSVRVQTVP
SMADVISGRARILDLRDVDVEDLLGRDQIQPDQLLMQRCIRGKVVMVTGAGGSIGSELCRQIITQKPARLVIVDSSEYAL
YHIDQELRKLNPSLVAASGESVVVPLLCSVQKENRIEVIMRTFGVQTVYHAAAYKHVPMVEHNIVEGVRNNVFGTWYSAE
AAIRAGVETFVLISTDKAVRPANVMGASKRMAELVLQGLASRQKKTRFCMVRFGNVLGSSGSVVPLFQEQILSGGPVTVT
HPDVMRYFMSIPEAAQLVIQASAMGLGGEVFLLDMGAPVRIADLARRMVHLMGYRVRQQGVAFDVRQGAMESGIEIAYTG
LRPGEKLYEELLIGHDSEITDHPRILKAREASLAWVEVAALMTELDRACHVFDCERVCEILRRAPTGFLPVSKSEDLVWQ
EHLKGVAHLDMVRPLASVGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-69 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbiI YP_003810290.1 epimerase/dehydratase VFG0029 Protein 5e-105 44