Gene Information

Name : argH (HDN1F_00960)
Accession : YP_003809346.1
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 135841 - 137241 bp
Length : 1401 bp
Strand : -
Note : silverDB:HdN1F128

DNA sequence :
ATGTCCACATCGCAAAAAGACAAACCTTGGGGTGGCCGCTTTTCGGAAGCCACCGACGCTTTCGTTGAAGCCTTTACCGC
TTCCGTGCAGTTCGACCAGAAGATGGCTATGCAGGACATCAATGGCTCGATTGCCCACGCCACCATGCTGGCGCGCACTG
GCATTCTGACGGACGATGAGCGGGAAAACATTCTGCTTGGGCTCGAACAAATCCGGAATGAAATTCAGTCTGGCAGCTTT
GACTGGTCGATCAAGCTGGAAGATGTGCATATGAACATTGAAGCACGTCTTACTGAACGTATCGGCATTGCCGGCAAAAA
GCTGCACACAGGCCGTTCTCGCAACGATCAGGTAGCCACCGATATTCGCCTTTATCTGCGCGACGCCATCGACGCCATTT
GCGCCGAAATCACGCGCCTGCAACACGGTTTGCTGGAGCTTGCCAGCCGCGAAGCCGACACCATTATGCCGGGCTTTACC
CATTTGCAAACCGCACAGCCGGTCACGTTTGGCCACCACATGCTCGCTTGGTTTGAAAATCTCTCGCGTGACTACGAACG
TTATATTGACGCCCGCAAACGCGTCAACCGTATGCCGCTGGGTGCCGCAGCCCTTGCAGGCACGACCTACCCAATTGATC
GTAACATTACCCGTGAGCTGCTCGGTTTTGAAGCACTTTGCGAAAACTCGCTAGACGCTGTTAGCGATCGGGATTTTGCA
ATTGAATTTACCGCCGCCAGCAGTATCCTGATGACGCATCTATCGCGTTTTTCGGAAGAATTGGTGCTATGGACTTCAGC
ACAATTCAATTTTATTGATCTACCGGATCGTTTTTGTACCGGCTCGTCCATAATGCCGCAAAAGAAAAACCCCGACGTAC
CGGAGCTTGTGCGCGGCAAAAGTGGGCGCGTAAATGGCCATTTAATCGCGCTGCTTACCCTGATGAAATCCCAACCGCTT
GCTTACAACAAGGACAATCAGGAAGACAAGGAGCCGCTGTTTGATACCGTCGATACCGTGCGAAACTGCCTGCGCGCCTA
TGCGGATATGATTCCTGCGATCGAAGTAAAGCGTGAGGTAATGCGAGAAGCCGCCAAGCGCGGATTTTCCACCGCAACCG
ATCTTGCCGATTATCTGGTAAAGCGTGGCGTAGCGTTTCGGGATTCTCACGAAATCGTTGGCAAGGCCGTACGTTATGGC
GTAGAGAATCGCAAAGACCTTGCCGAAATGTCTCTTGAGGAGCTGCGCCAGTTTAGCGATCAGATCAATAACGATGTATT
TGAGGTGCTTACACTGGAAGGCTCGGTGAATGCACGCAATCATATTGGTGGCACGGCACCTGTTCAAGTGCGTGCCGCAA
TTGCGCGTGCGCAGAACCGGCTGGCGAAACGCCTAGACTAA

Protein sequence :
MSTSQKDKPWGGRFSEATDAFVEAFTASVQFDQKMAMQDINGSIAHATMLARTGILTDDERENILLGLEQIRNEIQSGSF
DWSIKLEDVHMNIEARLTERIGIAGKKLHTGRSRNDQVATDIRLYLRDAIDAICAEITRLQHGLLELASREADTIMPGFT
HLQTAQPVTFGHHMLAWFENLSRDYERYIDARKRVNRMPLGAAALAGTTYPIDRNITRELLGFEALCENSLDAVSDRDFA
IEFTAASSILMTHLSRFSEELVLWTSAQFNFIDLPDRFCTGSSIMPQKKNPDVPELVRGKSGRVNGHLIALLTLMKSQPL
AYNKDNQEDKEPLFDTVDTVRNCLRAYADMIPAIEVKREVMREAAKRGFSTATDLADYLVKRGVAFRDSHEIVGKAVRYG
VENRKDLAEMSLEELRQFSDQINNDVFEVLTLEGSVNARNHIGGTAPVQVRAAIARAQNRLAKRLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 9e-170 75
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 9e-170 75