Gene Information

Name : Deba_0915 (Deba_0915)
Accession : YP_003806879.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1033935 - 1035251 bp
Length : 1317 bp
Strand : +
Note : COGs: COG1157 flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR004100:IPR000194:IPR005714:IPR020005:IPR 003593; KEGG: dma:DMR_45080 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/subunit beta central regi

DNA sequence :
ATGGGCGCGCCTTCCCTGGGCCGCTATTGCGACCAACTGCGGGCCTGTCAGCCGCTGACCGTTTTGGGCCGCGTCAGCCA
GGTGGTGGGCCTGGTGGCCGAGGTGCGGGGCCTGGAGTTGCCCGTGGGGGCCAGCGTTTTTCTGCATCTGGATGAAGGCC
CGGTGCTGGGCGAGGTGGTGGGCTTCAAGGGCCAGGGCGTGCAGATCATGCCCTACGCCGACACTCGCGGCCTGCGGCCG
GGCTGCCTGGTCTCCAGCGCCGGCGGCGCGGGCCTGGTCAAGGTGGGCCAGGCCCTGCTGGGCCGCGTGCTCGACGGCCT
GGGCAACCCCGTCGACGGCGGGCCCATGCCCGAGTGGGATCAATTATATCCGCTCTATCGCCAGGCGCCCTCGGCCATGG
GCCGGCCGCGCATCAGCCAGCCGGTGGACGTGGGGGTAAAGGTCATCAACGCCCTGCTGACCCTGGGCAAGGGCCAGCGC
ATCGGCATCTTCGCCGGCTCGGGCGTGGGCAAATCCACCCTGATGAGCATGATCGCCCGCCACACCCAGGCCGACATCAG
CGTCATCGGCCTGGTGGGCGAGCGCGGCCGCGAGCTGCGCGAATTCATCGAGCGCGATCTTGGCCCCGAAGGCCTGGCCC
GCAGCGTGGTCATCGTGGCCACCAGCGATCAGCCGGCCCTGGTGCGCATGCGCGCGGCCTATCTGGCCACGGCCGTGGCC
GAGTATTTCCGCGACCAGAGCCGCGACGTCATCTTGATGATGGACTCGGTGACCCGTTTCGCCATGGCCGGCCGCGAGGT
GGGCCTGAGCATCGGCGAGCCGCCCACCACCAAGGGCTACACGCCAAGCGTTTTCGCCCAATTGCCGCGCCTGCTGGAGC
GGGCCGGCACCAGCGAGGGCGGCGGCTCGATCACTGGCATCTACACCGTTTTGGTCGAGGGCGACGACGTCACCGAGCCG
GTGGCCGACGCCATGCGCTCGATCCTCGACGGCCACTTCGTGTTGACCCGGGCCCTGGCCGACCGTGGCCACTACCCGGC
CATCGAGCTGTTGGGCTCCATCAGCCGTTTGGCCCGCGACATCAATCCGCCCGAGGTGACCACCGCCGCGCGCCGGCTCA
CCGAGTTGCTGGCCGCCTATCGCCGCAACGAGGATCTGATCAACATCGGGGCCTACGCCGATGGCTCCAACCCGGTAATC
GACCGGGCCATCCGCATGATGGAGCGCATCAACAAGTTTCTGACCCAGCCCGTGGAAAAAGGCGTCGACATCACCGCCAG
CCGCCGCGAACTGGTCCAACTGATGGCCCAGAAGTAG

Protein sequence :
MGAPSLGRYCDQLRACQPLTVLGRVSQVVGLVAEVRGLELPVGASVFLHLDEGPVLGEVVGFKGQGVQIMPYADTRGLRP
GCLVSSAGGAGLVKVGQALLGRVLDGLGNPVDGGPMPEWDQLYPLYRQAPSAMGRPRISQPVDVGVKVINALLTLGKGQR
IGIFAGSGVGKSTLMSMIARHTQADISVIGLVGERGRELREFIERDLGPEGLARSVVIVATSDQPALVRMRAAYLATAVA
EYFRDQSRDVILMMDSVTRFAMAGREVGLSIGEPPTTKGYTPSVFAQLPRLLERAGTSEGGGSITGIYTVLVEGDDVTEP
VADAMRSILDGHFVLTRALADRGHYPAIELLGSISRLARDINPPEVTTAARRLTELLAAYRRNEDLINIGAYADGSNPVI
DRAIRMMERINKFLTQPVEKGVDITASRRELVQLMAQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-80 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-82 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-81 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-80 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-81 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-82 51
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-85 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-81 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-81 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-70 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-68 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-69 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 8e-69 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-69 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-69 47
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-70 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-70 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-70 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-71 46
escN AAC31513.1 L0034 Virulence LEE Protein 9e-71 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 9e-71 46
escN AAC38383.1 EscN Virulence LEE Protein 8e-71 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-70 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-70 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-70 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-70 45
escN AAK26715.1 EscN Virulence LEE Protein 2e-70 45
escN AAL57542.1 EscN Virulence LEE Protein 2e-70 45
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-70 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-70 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-59 43
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-56 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-61 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-60 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-60 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-59 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-54 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-54 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-54 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-54 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-56 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-56 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-69 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 3e-62 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-62 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-62 41
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-84 50
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-77 50
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-81 50
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG2144 Protein 9e-88 49
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-79 49
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG2499 Protein 3e-76 49
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0515 Protein 5e-69 47
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG1254 Protein 4e-79 46
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0730 Protein 5e-71 46
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0812 Protein 5e-71 46
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG0555 Protein 1e-54 42
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG1008 Protein 3e-57 42
Deba_0915 YP_003806879.1 flagellar protein export ATPase FliI VFG1778 Protein 2e-57 41